Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00157 ATGGCCGAAGCTTCAACAGTCACCTTCTTCTCCACTCTCCTTACCCCTTTCCGCCCCCACGCCCATGTGTCTCACCGTCCCCTGACCCTCCCACGGAAGCTCCAGGTTCGCTGCTCGGTGTCCGCCGGTGCGACTCCCCAGAACGCAGTGGCTTGGGGATGCGAGATTGAGTCGCTGGAGAGTGCGTCGGCGCTCCAGAGGTGGCTGTCGAAGTCGGGGCTTCCGCCACAGAAGATGGGGATAGATAGGGTGGAGGTGGGAGAGAGAGGACTTGTGGCTTTGAAGAGCATAAGGAAAGGGGAAAAGCTGCTCTTTGTGCCTCCCTCTCTTGTCATCACTCCCAATTCAGAGTGGAGTCACCCTGAAACTGGTGAAGTATTGAAAAGAAATTCAGTGCCAGATTGGCCTTTGCTTGCAACTTACCTCATAAGTGAAGCTAGCCTCATGGAATCTTCAAGATGGAGCAATTATATATCAGCCTTACCTCGTCAACCTTACTCGCTTCTTTACTGGTCCCAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAATACCCTGATTTATTCCCTGAGGAGGTGTTCAACATTGAGTCCTTCAAATGGTCATTTGGTATTCTTTTCTCCCGCTTGGTTCGGTTACCCTCAATGGATGGACAGGTTGCCTTGGTTCCTTGGGCTGATATGTTAAATCATAGTTGTGAGGTGGAGACATTTTTGGATTATGACAAGCAATCAAAGGGAATTGTCTTCACAACAGATCGGCCCTATCAACCAGGTGAGCAGGTGTTTATTTCGTATGGAAAAAAATCAAATGGGGAGCTTTTGCTATCTTACGGATTTGTTCCCAAGGAAGGTGGCAATCCCAGTGATTCAGTTGAGTTGTCACTGTCACTAAAGAAATCCGATGCATCCTACAAGGAGAAGTTAGTACTGTTGAAGAAATACGGATTGTCAGCATCTCAGTGTTTTCCTATACAGATAACTGGTTGGCCATTGGAACTATTGGCTTATGCTTATTTAGCTGTCAGTCCTTCAAGCATGAGAGAAAATTTTGAAGAGATGGCTGCTGCAGCATCAAATAATACCACCTCCAAGAAGGATTTGATATATCCTGAAATAGAGGAGCAAGCATTGCAATTCATACTAGACAGCTGCGAGGCAAGCATATCAAAATACAACAAGTTCTTGCAGGCAAGTGGATCACTGGATTTGGATGTGACTTCTCCTAAACAACTCAACAGAAGGCTCTTTCTGAAACAGCTAGCTGTGGATTTGTGTAATAGCGAGCGAAGGATTTTATTTCGTGCTCAATACATACTGAGAAGAAAACTGAGAGACATGAGGGCTGGTGAATTAAGAGCCCTAACAATATTCAACGGTTTCCGGAAATTTTTCCAATGA 1479 0.4537 MAEASTVTFFSTLLTPFRPHAHVSHRPLTLPRKLQVRCSVSAGATPQNAVAWGCEIESLESASALQRWLSKSGLPPQKMGIDRVEVGERGLVALKSIRKGEKLLFVPPSLVITPNSEWSHPETGEVLKRNSVPDWPLLATYLISEASLMESSRWSNYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPEEVFNIESFKWSFGILFSRLVRLPSMDGQVALVPWADMLNHSCEVETFLDYDKQSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGGNPSDSVELSLSLKKSDASYKEKLVLLKKYGLSASQCFPIQITGWPLELLAYAYLAVSPSSMRENFEEMAAAASNNTTSKKDLIYPEIEEQALQFILDSCEASISKYNKFLQASGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRKLRDMRAGELRALTIFNGFRKFFQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00157 492 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 323 488 IPR036464 -
Phac6g00157 492 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 60 429 - -
Phac6g00157 492 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 46 306 - -
Phac6g00157 492 SUPERFAMILY SET domain 61 310 IPR046341 -
Phac6g00157 492 Gene3D - 312 477 IPR036464 -
Phac6g00157 492 SMART set_7 77 299 IPR001214 GO:0005515
Phac6g00157 492 CDD SET_RBCMT 71 307 IPR044431 GO:0016279|GO:0018022
Phac6g00157 492 Gene3D set domain protein methyltransferase, domain 1 30 306 - -
Phac6g00157 492 FunFam Rubisco methyltransferase family protein 312 475 - -
Phac6g00157 492 Pfam SET domain 89 293 IPR001214 GO:0005515
Phac6g00157 492 ProSiteProfiles SET domain profile. 77 293 IPR001214 GO:0005515
Phac6g00157 492 PIRSF RMT_SET 1 489 IPR011192 GO:0009507|GO:0030785
Phac6g00157 492 Pfam Rubisco LSMT substrate-binding 326 459 IPR015353 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00157 Phac-Chr6 1742235 1749059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00157 64 262 NAC Transcription Factor Family AT3G56570 22.549 1.24e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac6g00157 SET 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00157 - - gmx:100803319 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00157 6 1742235 1749059 Phac6g00157 6 1742235 1749059 ECH