Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00145 ATGGGTTATATATGTGATTTTTGTGGAGACCAGAGATCCATGGTGTACTGCCGCTCTGATGCTGCCTACTTATGTTTGTCTTGTGATCGGAATGTTCATTCGGCTAATGCCCTTTCCAGGCGCCATTCACGCACCCTTTTGTGTGAGAGATGCAATTCACAACCTGCCTTTGTGAGGTGTGTTGAAGAGAAAATTTCACTGTGTCAGAATTGTGATTGGTTGGGTCATGGAGTCTCTACATCTTCAACACATAAGAGACAAGCAATCAGTTGCTACTCTGGCTGCCCTTCAGCGGCGGAACTGTCTTCAATATGGTCCTTTGTGCTGGATATCCCTTCCATTAGAGAGTCTACATGTGAGCAAGAACTAGGCTTAATGAGTATTAATGAGAACAACAAGAGTGTTGGAGTTCTACCTGAAAATGGGAATGTGTCTGGTTCAGATCAAGTTACTGATCTACCTTCTTTGGACAAGTCTTTGGTTGGTACATCTTCAGTACCCGAGTCAAGCTCCAAACCTCCAGCTGGACCTGCCAATGAATGTCTGCCAAAGTTGTACTGTCCTGCTGCAAAATGCCCTGCATTATGTGAAGATGATAATCTATATGATGATTTTGACATGGATGAAATGGATCTAAATCTTGAGAACTACGAAGAACTTTTTGGTGTGGCCCTCAGTCATTCCGAAGAGCTATTTGAAAATGGTGGATTTAATAGTTTGTTTGGGACAAAAGACATGTCTGCAGGAGATTCCAGTTGTCAGGATGCCATTGCTGCCGAGGGGTCATCGGTTGGACTGGTCAATGCAACACAACCGGCTTGCAGCAACGCAGCATCTGCAGATTCCATTTTGAGTACTAAAACCGAACCGATTCTTTGTTTGACGGGGAGGCAAGCTCAATCAAACCTTTCTTTTTCTGGCATTACCGGAGAGAGTAGTGCTGCAGACTATCAAGACTGTGGGGCTTCTTCCATGCTTCTCAGGGGAGAACCTCCTTGGTTTGCTCCTTGTCCTGAGAATTCCTTACAATCTGCCAACCGCAGCAATGCTGTCTTGCGCTACAAGGAAAAGAAGAAGGCGCGAAAGTTCGAAAAACAAGTGCGGTATGCCTCTCGCAAGGCAAGGGCCGATGTCAGAAGGCGGGTGAAGGGCCGGTTTGTGAAAGCCGGTGACGTCTACGATTATGACCCTTTGAGCACAACCAGAAGCTACTGA 1215 0.4601 MGYICDFCGDQRSMVYCRSDAAYLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCVEEKISLCQNCDWLGHGVSTSSTHKRQAISCYSGCPSAAELSSIWSFVLDIPSIRESTCEQELGLMSINENNKSVGVLPENGNVSGSDQVTDLPSLDKSLVGTSSVPESSSKPPAGPANECLPKLYCPAAKCPALCEDDNLYDDFDMDEMDLNLENYEELFGVALSHSEELFENGGFNSLFGTKDMSAGDSSCQDAIAAEGSSVGLVNATQPACSNAASADSILSTKTEPILCLTGRQAQSNLSFSGITGESSAADYQDCGASSMLLRGEPPWFAPCPENSLQSANRSNAVLRYKEKKKARKFEKQVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSTTRSY* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00145 404 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 391 - -
Phac6g00145 404 CDD Bbox1_BBX-like 47 89 - -
Phac6g00145 404 ProSiteProfiles Zinc finger B-box type profile. 43 89 IPR000315 GO:0008270
Phac6g00145 404 ProSiteProfiles CCT domain profile. 347 389 IPR010402 GO:0005515
Phac6g00145 404 SMART bboxneu5 48 89 IPR000315 GO:0008270
Phac6g00145 404 SMART bboxneu5 4 47 IPR000315 GO:0008270
Phac6g00145 404 MobiDBLite consensus disorder prediction 137 176 - -
Phac6g00145 404 MobiDBLite consensus disorder prediction 137 172 - -
Phac6g00145 404 CDD Bbox1_BBX-like 4 47 - -
Phac6g00145 404 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac6g00145 404 Pfam CCT motif 347 389 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00145 Phac-Chr6 1636780 1642307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00145 1 404 C2C2-CO-like Transcription Factor Family AT3G07650 56.220 1.37e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac6g00145 CCT 1.9e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00145 - - pvu:PHAVU_006G005200g 806.979