Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00051 ATGTGTGAGGATGATTATGGTTTGCATCCACAGTTCTTGTCCGGGATAAAGACAGTTGTGGTGATATCTGTTAAACCATGGGGAGTGGTACAATTTGGATCCAAAAAGAAGATTTTGGATAGAGTGAAATTTGTGGAACAAACAGAAAGGTTGTTGAGGGGGATAGAAGATGAGGGTTTGCTTGACGTATTCAATAGTAGTAGAGATCTATATCTAGATTGTGAAAACTATGATCTCAATGGATTGTTGGCTTCCATATCTTCAGAAAATTTATATGATTGGAATCTCAAATCTGTTCATAGTGACAACTCTGAAATGCTATTGGGAAATTCATGTTCCTATGCAAGTCTTGATGACTCCCTCCCTTCCATGGATATGATTCTTGTTGAAGAAGGAACGACACGGATGCATGGATTCTCTTATCTTTGTGACCAATTGGCACCTGCAGTAGAAGCTCAAGCTGTATTCTCGGATAGGGATAGTACTGATTATTCTATGAACACCATAATTTCTAGAAACCCCAGTTTTGGCACATGGAGTGGTGAAATTTCATCATTGAATTCGCTGGGGCAACAAACGGTATCTGAGATAAGGGATGAAGATGTTGAGTATATGCACTGTAAAGAGGCAAATGAATTTTCTAGTAACAAGCTAGCTGTTCAGGATTCAACATTGTCCTCATTAATTAGTTTGAATAGACTGTTAGACCCAACAGGCCCATTTCAATACCACACAGGATTTCCACTAGATATCCAACATTCTGCTCAATCTAGTATTGTGGGAGAAGTTAATTATCCTGATACTTTGAGTATGGTGCATGACCTCCCCAAGGACCTAGAGCCAGTTGATTCATTAGAACAATTTTCAAAGTTCTTCTCCATGAATGATCTCTGCCATTTGTTAGCTCCTTCAGACCACAGCATTTATGGAACAGTGACTGCATTGGATGAGTCACAAGGATGTAATACCCCATCTTTTGGTCTGATTGGTAGTGGTGGCATTGATGATGTTCCAGTCACATATCAAGCTGAGCATAAAAGTTCTATCACAACTACACCCAACATGGATGGTCAAGAAACATACTCAGCTATGCATTGTTCTGAAAACAGTCTCTTGGATAGCATGAGACATCATTTGAGCTGTGACCAAGCCGAGGAGTGGTGGGACAGTGTGGCTATGCTTACACCAGTGGTGAGTGCTGCTGCTACTAACACTGCTTTCTCTGGTTGCATATCAGAGTCAAATGTTGGAACATTTGGCTCTGGAAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGTTTCTTAATGGTTCTAATTTTGGAGATCAACCATCAACCAATAGAAAGCAGAGGACAGAATCTTCACCTGAGAATAGAAATACAAAGCATTTGGCTAGTCATGCTTTGGTTCCTAAATTGGACATGACAAACAATCTTGTAGACCAGAAAGAAATATTCACAAAGTCACAGGTAGGAGTAGGAGGCTTGTGGATAAATGACAGAAATGGAAATACCGGGAGAGCTGATCGGGCAGATGCAAAGCCTCAAAAGGTGGTGGAACACAATAAGGTCACCAGGAAAAGGGCTAGACCAGGTGAAACAACTCGACCGAGACCTAAAGATCGTCAGCAGATTCAAGACCGCATTGGAGAGTTGAGAGGGATCATTCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGAACCATCAGATACATGATATTCTTACAAAGCATCACCAAGTATGCAGACAAGCTGCAAGAGCCCAGTGAGCCTAAGCTCATTGAGAAGGCAAAAGACAGCAGTGTGGGAGATAGCAAGAAAAGTGGTGGTGGTGTTACATGTGCATTTGAAGTGGAAGGTCAAACAATGGTATGCCCAATTATAGTGGAGGATATGGACCCACCTGGCCAAATGCTTATAGAGATGCTTTTTGAAGAGCAGGGCTCCTTCCTTGAGATAGTGGACATCATTGGTGGGTTTGGATTGAATATCTTGAAGGGAAAGATGGAAATTAGGGACACTAAAATATGGGCACGCTTTATAGTTGAGGCGAACAGACATGTAACAAGGATAGATGTATTTTGGTCCCTCATCAGAGTTGTACAGCAGAAAAACACATCTGGAGCGGATTCACCAAACAGGCATTGTAATATTAATGATGCTGCCTTTTCTTCAATGGACAAATATGAGCAACAGATATGCCAGTACTACCCATGTACATGA 2232 0.4122 MCEDDYGLHPQFLSGIKTVVVISVKPWGVVQFGSKKKILDRVKFVEQTERLLRGIEDEGLLDVFNSSRDLYLDCENYDLNGLLASISSENLYDWNLKSVHSDNSEMLLGNSCSYASLDDSLPSMDMILVEEGTTRMHGFSYLCDQLAPAVEAQAVFSDRDSTDYSMNTIISRNPSFGTWSGEISSLNSLGQQTVSEIRDEDVEYMHCKEANEFSSNKLAVQDSTLSSLISLNRLLDPTGPFQYHTGFPLDIQHSAQSSIVGEVNYPDTLSMVHDLPKDLEPVDSLEQFSKFFSMNDLCHLLAPSDHSIYGTVTALDESQGCNTPSFGLIGSGGIDDVPVTYQAEHKSSITTTPNMDGQETYSAMHCSENSLLDSMRHHLSCDQAEEWWDSVAMLTPVVSAAATNTAFSGCISESNVGTFGSGKRLFSELGIEEFLNGSNFGDQPSTNRKQRTESSPENRNTKHLASHALVPKLDMTNNLVDQKEIFTKSQVGVGGLWINDRNGNTGRADRADAKPQKVVEHNKVTRKRARPGETTRPRPKDRQQIQDRIGELRGIIPNGGKCSIDSLLDRTIRYMIFLQSITKYADKLQEPSEPKLIEKAKDSSVGDSKKSGGGVTCAFEVEGQTMVCPIIVEDMDPPGQMLIEMLFEEQGSFLEIVDIIGGFGLNILKGKMEIRDTKIWARFIVEANRHVTRIDVFWSLIRVVQQKNTSGADSPNRHCNINDAAFSSMDKYEQQICQYYPCT* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00051 743 MobiDBLite consensus disorder prediction 501 544 - -
Phac6g00051 743 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 736 IPR043561 GO:0003700|GO:0006355
Phac6g00051 743 MobiDBLite consensus disorder prediction 505 544 - -
Phac6g00051 743 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 542 584 IPR036638 GO:0046983
Phac6g00051 743 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 529 578 IPR011598 GO:0046983
Phac6g00051 743 MobiDBLite consensus disorder prediction 437 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00051 Phac-Chr6 630968 635573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00051 526 714 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.968 4.14e-61 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00051 - - pvu:PHAVU_006G000400g 1462.97