Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00043 ATGCCCTTCCTTAGAAGTTTTAAAATTAACCTCTTTCTGGTGTCTCTCTTTGCTACTTGGGTTCAAATCCAACCCAAGGTGCAATGTTACCAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCATTTCATCAAATTCACAAGTCTATGACAAATGGTCCAAATATCACAACCTCAAAATCGGTGATTCGCTCCTGTTTCTGTACCCTCCAAGCCAAGATTCATTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAGATCCAATCTTGTACATGAACAATGGGAACTCGTTGTTCAACATCACATCAGAAGGGGAGTTTTACTTCACCAGTGCAGAGTCTGGTCATTGCCAAAAGCATCAAAAGCTTCACATAACTGTGGGAGTTGGAGGAAACACCGACACACTTTCTCCAACTTCACTGCCTCAATCCGCACCTTCTTACCCAACTGCTTTTGGCGACATTCCCATGTCTCCTTCTAGTACTTCTTCCTCACCTCACCCAACTTCAAAATTTTCACTCATAGTTATTGGATTCTTCCTCTGTGCACTGCTCTCTAGCCTAGTAAGATCATCTTAA 594 0.4242 MPFLRSFKINLFLVSLFATWVQIQPKVQCYQYKVGDLDSWGIPISSNSQVYDKWSKYHNLKIGDSLLFLYPPSQDSLIQVTEESYKSCNLKDPILYMNNGNSLFNITSEGEFYFTSAESGHCQKHQKLHITVGVGGNTDTLSPTSLPQSAPSYPTAFGDIPMSPSSTSSSPHPTSKFSLIVIGFFLCALLSSLVRSS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00043 197 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Phac6g00043 197 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Phac6g00043 197 Gene3D - 30 142 IPR008972 -
Phac6g00043 197 PANTHER BLUE COPPER PROTEIN 30 161 IPR039391 GO:0009055
Phac6g00043 197 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Phac6g00043 197 FunFam Early nodulin-like protein 1 29 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00043 Phac-Chr6 549231 550768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00043 26 162 Phytocyanin Superfamily AT1G64640 63.043 5.03e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00043 - - var:108342497 340.887