Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00042 ATGGGAGGGACTCATGAACAAAGCCAAAACTTCTCCACCAACCCTTCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACAGAGCCATCTATCTTCCCTTCAACCAACTGGTTGCCGTCAAGTGCTTGGATCTCGATCGCTGTGACATCAATCTCGATGATTTGCGAAGGGAGGCGCAGACGATGAGTCTGGTCGATCATCCGAACGTGGTGAAGGCATACTGCTCCTTCGCGGTGGAGCGGAGTCTGTGGGTGGTGATGCAGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGACTGCGTATATGGAAGGGTTCGAGGAGGAGGCAATCAGATCCATCCTCAAAGAAACTCTGAAGGCCCTGCAGTACCTCCACCACCACGGCCACATTCATCGGGACGTCAAGGCCGGCAACATTTTACTCAGCAGCAGCGGCGCGGTCAAGCTCGCCGACTTCGGTGTTGCCACTTGCTTGTTCGACGCCGGCGACAGGCAGCGCTGCAGAAACACTTTTGTCGGGACCCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCTTCTAGTGGCTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTAGAGTTGGCTCATGGTCATGCCCCGTTTTCAAAATACCCTCCAATGAAGGTTCTTCTAATGACTATACAGAATGCCCCTCCTGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCCAACTCTCTTTAAAAAAACTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGATGCAGCTCAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGAATGATGATGATATTGCTGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACCAATTACAAGGCTGGTGCCGTTGATTCCCAGTCTGGTAATGGCAAAATGAATTCAGAGAAATCACAACTGAATAAAATCACATCACAGGTAGGGGCTATTGACATAAAAGAGACTGAGCAGAGTGAATACTTAAAAAAAAACAAGAAGATTCCAGAAAGCGAAATCCAGGAACTTGGATTTCCCAAAAATATTTTTTGGGAAAGAAATGTGTCAACTTCGAAAGCAACTGCATCTAACGTAGAGAAAGATATAATTATGACCAAAACTAAAGACCAAATGGTAAAAAGTCGTCAAACCCATAGTGGACCACTGTTGCCAGTCACAATTCTCAATCATTCGAAATTAGAAAGGGAACGAATATCAACAAGGCTTGAGAATGGAAATCAGGTACTGGATAAGAAAAATAATCGTGAAGTGCAACGACCTCCAAATTTTAGCGGTCCATTGATGCTTCCACCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGATTCAGGGATTCCTTGGATGTTAAGTCTAAGGCTAATCAAGTACAAATTAAAGGGCGATTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAATTAATCAGGGCACCAAGGATCCTGCCACCAACAATATCTCTGCATCACTTCTTTTGACTCACCTTCAAAATCTTCTCCAGCAAACATCAATGCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAATCTGCTGAAGGGAATGAAGTTTCACATAATGGAAAGTTGCCACCAATACCTCGCAGTTCAGAAATTAATGGGAGTGTTGACACAGCAGCTGCAGAGAGGGAACGTCTTCTGCTGCTCAAAATTATAGAGCTACATACTCGCATGATGACTTTGACTGATGAATTGACCGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACGGCTCTCCAAACTAAGGAACAAAATAGGGACAAGCTTATTAATCCACCTGTTAGTGATGTGTGA 2184 0.4409 MGGTHEQSQNFSTNPSDYKLLEEVGYGATATVYRAIYLPFNQLVAVKCLDLDRCDINLDDLRREAQTMSLVDHPNVVKAYCSFAVERSLWVVMQFMDEGSCLHLMKTAYMEGFEEEAIRSILKETLKALQYLHHHGHIHRDVKAGNILLSSSGAVKLADFGVATCLFDAGDRQRCRNTFVGTPCWMAPEVLQPSSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPQLSLKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEAISQSQYQRGVSAWNFDIDDLKAQASLVRNDDDIAEMREEDENNFFTNYKAGAVDSQSGNGKMNSEKSQLNKITSQVGAIDIKETEQSEYLKKNKKIPESEIQELGFPKNIFWERNVSTSKATASNVEKDIIMTKTKDQMVKSRQTHSGPLLPVTILNHSKLERERISTRLENGNQVLDKKNNREVQRPPNFSGPLMLPPRASANSLSAPIKSSGGFRDSLDVKSKANQVQIKGRFSVTSENLDLVKGSSLRKSASVSDWMLDSKQMPINQGTKDPATNNISASLLLTHLQNLLQQTSMQQDLIMNLLNSLQSAEGNEVSHNGKLPPIPRSSEINGSVDTAAAERERLLLLKIIELHTRMMTLTDELTAEKLKYMQLQQQLTALQTKEQNRDKLINPPVSDV* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00042 727 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Phac6g00042 727 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00042 727 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Phac6g00042 727 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Phac6g00042 727 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Phac6g00042 727 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00042 727 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 696 IPR047173 GO:0043539
Phac6g00042 727 CDD STKc_OSR1_SPAK 16 279 - -
Phac6g00042 727 Coils Coil 685 712 - -
Phac6g00042 727 SUPERFAMILY Protein kinase-like (PK-like) 16 334 IPR011009 -
Phac6g00042 727 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Phac6g00042 727 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00042 Phac-Chr6 532542 548980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00042 11 714 MAP Kinase Kinase Kinase Kinase AT4G10730 63.031 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phac6g00042 Pkinase 6.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00042 - - vun:114187757 1169.45