Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00040 ATGCCCCTCCTGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTTGTGATCAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCCAACTCTCTTTAAAAAAACTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGATGCAGCTCAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGAATGATGATGATATTGCTGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACCAATTACAAGGCTGGTGCCGTTGATTCCCAGTCTGGTAATGGCAAAATGAATTCAGAGAAATCACAACTGAATAAAATCACATCACAGGTAGGGGCTATTGACATAAAAGAGACTGAGCAGAGTGAATACTTAAAAAAAAACAAGAAGATTCCAGAAAGCGAAATCCAGGAACTTGGATTTCCCAAAAATATTTTTTGGGAAAGAAATGTGTCAACTTCGAAAGCAACTGCATCTAACGTAGAGAAAGATATAATTATGACCAAAACTAAAGACCAAATGGTAAAAAGTCGTCAAACCCATAGTGGACCACTGTTGCCAGTCACAATTCTCAATCATTCGAAATTAGAAAGGGAACGAATATCAACAAGGCTTGAGAATGGAAATCAGGTACTGGATAAGAAAAATAATCGTGAAGTGCAACGACCTCCAAATTTTAGCGGTCCATTGATGCTTCCACCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGATTCAGGGATTCCTTGGATGTTAAGTCTAAGGCTAATCAAGTACAAATTAAAGGGCGATTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAATTAATCAGGGCACCAAGGATCCTGCCACCAACAATATCTCTGCATCACTTCTTTTGACTCACCTTCAAAATCTTCTCCAGCAAACATCAATGCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAATCTGCTGAAGGGAATGAAGTTTCACATAATGGAAAGTTGCCACCAATACCTCGCAGTTCAGAAATTAATGGGAGTACGTTTGTGTCATTGACAGGTTGA 1317 0.3948 MPLLDLIMTVIRSSLSCDQSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPQLSLKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEAISQSQYQRGVSAWNFDIDDLKAQASLVRNDDDIAEMREEDENNFFTNYKAGAVDSQSGNGKMNSEKSQLNKITSQVGAIDIKETEQSEYLKKNKKIPESEIQELGFPKNIFWERNVSTSKATASNVEKDIIMTKTKDQMVKSRQTHSGPLLPVTILNHSKLERERISTRLENGNQVLDKKNNREVQRPPNFSGPLMLPPRASANSLSAPIKSSGGFRDSLDVKSKANQVQIKGRFSVTSENLDLVKGSSLRKSASVSDWMLDSKQMPINQGTKDPATNNISASLLLTHLQNLLQQTSMQQDLIMNLLNSLQSAEGNEVSHNGKLPPIPRSSEINGSTFVSLTG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00040 438 Gene3D Transferase(Phosphotransferase) domain 1 3 75 - -
Phac6g00040 438 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 18 412 IPR047173 GO:0043539
Phac6g00040 438 MobiDBLite consensus disorder prediction 412 438 - -
Phac6g00040 438 SUPERFAMILY Protein kinase-like (PK-like) 12 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00040 Phac-Chr6 532542 548980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00040 2 438 MAP Kinase Kinase Kinase Kinase AT4G10730 51.345 8.74e-128 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00040 - - vun:114187757 609.757