Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00038 ATGCCCCTCCTGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTTGTGATCAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCCAACTCTCTTTAAAAAAACTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGATGCAGCTCAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGAATGATGATGATATTGCTGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACCAATTACAAGGCTGGTGCCGTTGATTCCCAGTCTGGTAATGGCAAAATGAATTCAGAGAAATCACAACTGAATAAAATCACATCACAGGTAGGGGCTATTGACATAAAAGAGACTGAGCAGAGTGAATACTTAAAAAAAAACAAGAAGATTCCAGAAAGCGAAATCCAGGAACTTGGATTTCCCAAAAATATTTTTTGGGAAAGAAATGTGTCAACTTCGAAAGCAACTGCATCTAACGTAGAGAAAGATATAATTATGACCAAAACTAAAGACCAAATGGTAAAAAGTCGTCAAACCCATAGTGGACCACTGTTGCCAGTCACAATTCTCAATCATTCGAAATTAGAAAGGGAACGAATATCAACAAGGCTTGAGAATGGAAATCAGGTACTGGATAAGAAAAATAATCGTGAAGTGCAACGACCTCCAAATTTTAGCGGTCCATTGATGCTTCCACCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGATTCAGGGATTCCTTGGATGTTAAGTCTAAGGCTAATCAAGTACAAATTAAAGGGCGATTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAATTAATCAGGGCACCAAGGATCCTGCCACCAACAATATCTCTGCATCACTTCTTTTGACTCACCTTCAAAATCTTCTCCAGCAAACATCAATGCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAATCTGCTGAAGGGAATGAAGTTTCACATAATGGAAAGTTGCCACCAATACCTCGCAGTTCAGAAATTAATGGGAGTGTGAGTAATTTTTGCCCAATTTATCCTTTAAACTAG 1329 0.392 MPLLDLIMTVIRSSLSCDQSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPQLSLKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEAISQSQYQRGVSAWNFDIDDLKAQASLVRNDDDIAEMREEDENNFFTNYKAGAVDSQSGNGKMNSEKSQLNKITSQVGAIDIKETEQSEYLKKNKKIPESEIQELGFPKNIFWERNVSTSKATASNVEKDIIMTKTKDQMVKSRQTHSGPLLPVTILNHSKLERERISTRLENGNQVLDKKNNREVQRPPNFSGPLMLPPRASANSLSAPIKSSGGFRDSLDVKSKANQVQIKGRFSVTSENLDLVKGSSLRKSASVSDWMLDSKQMPINQGTKDPATNNISASLLLTHLQNLLQQTSMQQDLIMNLLNSLQSAEGNEVSHNGKLPPIPRSSEINGSVSNFCPIYPLN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00038 442 Gene3D Transferase(Phosphotransferase) domain 1 3 75 - -
Phac6g00038 442 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 18 412 IPR047173 GO:0043539
Phac6g00038 442 SUPERFAMILY Protein kinase-like (PK-like) 12 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00038 Phac-Chr6 532542 548980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00038 2 432 MAP Kinase Kinase Kinase Kinase AT4G10730 51.364 2.77e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00038 - - vun:114187757 610.142