Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00024 ATGTCCACCCACCGAGTGTTCCAGCTTAAGCTTCATCCATTAACAGGTGACTCTGAATGGGTCGTCATCGAAGACAACGAGGAGAGCTTCGCCCAGAATTTCCACAAGCCCTTCCTTGCCACGACATCGTATTTGGACATGCTCAATGACTCCGCCAGAAACGCTGCATTTCGCCAAGCCATTCAGAAAACCATCACCAAACCTTGTCATGTTCTCGATATCGGTGCTGGAACTGGGTTGCTTTCAATGATGGCTGCTCGTGCCATGGGTGACGAAGGGAGGGTTACAGCATGTGAATCTTATCTTCCCATGGTGAAGCTGATGAAGAAGGTGTTGCGCCTTAATGGTATGGAGGGAAGAGTCAAAATCATCAACAAGCGCTCTGATGAACTCCAAGTTGGTCTTGATATCCCTTTACGAGCCCATGTTCTTGTAAGCGAGATACTTGATTCAGAGCTACTGGGTGAGGGGCTTATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAATGCTCTGACTGTGCCATATCGAGCAACTATACATGGACAGCTGGTTGAAAGCACATTCTTATGGAAGTTGCATGATTTTCATAACAATGAGGCTACTATATCTGATGGCATTCGACTTACTCCTCCAGGGCTTGGCAGTGTGCTAACTGTCAAACATCAGCAATATGCCATGCATGTCGATCCCATACAAGAAGAAATAACATTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGTTGTGTGTAAAGGCAACGAATGATGGGAGAGTTCATGTTGTGATCTCTTGGTGGGTACTTCAACTCGATCAGGAAGGGACCATCTATTATTCCACTGCTCCAAGGTGGATAAGCTCACCAACAACTACAAGTCCTGTTGGTTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTCCCAGGAAGTGGTATTTCCATACTCAAAGGGGAAGAAATTCATTTACTTGCTACTCATAATGAAACTAGTTTCTCATATAATTTTGATACCCGAGTACCAGCTTCTGAGATTTTGAATCATAAATGCATGACTGGAGATTTTCAGCTTGTACTACCACCAGAAAGAGCTGCAATTTATGCAGACAAAGAATGGAGGCTTTCAATGTTGAAAGCAGTACAAAGCATGGGAAAAGATCGTTTGTTATGCTTGGTTGTAGATGATAGTGTTGTTTTACCACTTCTTGTGGCAAAGCTTTCAGAAGCAAGTATAATGTCACTATTTCCAGGGTTGAGGGAAAGGGGCCTCCAATATTTGCAAGCAGTTGCCCATGCAAATGGTTTGTCACATAGTTGCATTGAAGTTCTTGAAAAAAGCGTTCAACAGTTAAACATGCATGATATACATCAGAAAAAGGTTGATCTGTTAATTGCAGAACCTTTCTATGTAGGACACGATGGTATGCTGCCATGGCAGAACCTGCGATTTTGGAGAGATCGTACCACACTTAATGATATTCTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGAGCATGTGCCATGTCTCTTCCTGATCTTTGGAGAAGTCGTTGTTGCCTGAGTAATATTGAAGGTTTTGACCATTCTGTGGTAAATGCTACATTGGGGGCTTGCGGTCATCTACCTGAACTAGAAGAGGGTCCCTGTCTCCCTTTTTTCGTCTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGACGTGATGGAGTTTGATTTTTCAAAACAAATATGCGAATGTCAAGGAAAATCCCAGGTATTATGA 1824 0.4287 MSTHRVFQLKLHPLTGDSEWVVIEDNEESFAQNFHKPFLATTSYLDMLNDSARNAAFRQAIQKTITKPCHVLDIGAGTGLLSMMAARAMGDEGRVTACESYLPMVKLMKKVLRLNGMEGRVKIINKRSDELQVGLDIPLRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENALTVPYRATIHGQLVESTFLWKLHDFHNNEATISDGIRLTPPGLGSVLTVKHQQYAMHVDPIQEEITLLSEPFKIFEFDFWKRPESYGETELCVKATNDGRVHVVISWWVLQLDQEGTIYYSTAPRWISSPTTTSPVGWCDHWKQCVWFVPGSGISILKGEEIHLLATHNETSFSYNFDTRVPASEILNHKCMTGDFQLVLPPERAAIYADKEWRLSMLKAVQSMGKDRLLCLVVDDSVVLPLLVAKLSEASIMSLFPGLRERGLQYLQAVAHANGLSHSCIEVLEKSVQQLNMHDIHQKKVDLLIAEPFYVGHDGMLPWQNLRFWRDRTTLNDILSEDALIIPSKGILRACAMSLPDLWRSRCCLSNIEGFDHSVVNATLGACGHLPELEEGPCLPFFVWQCGEFDVLSETFDVMEFDFSKQICECQGKSQVL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00024 607 CDD AdoMet_MTases 71 125 - -
Phac6g00024 607 Gene3D Vaccinia Virus protein VP39 371 517 IPR029063 -
Phac6g00024 607 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 55 123 - -
Phac6g00024 607 FunFam Protein arginine N-methyltransferase 1.6 180 365 - -
Phac6g00024 607 Gene3D Vaccinia Virus protein VP39 38 179 IPR029063 -
Phac6g00024 607 FunFam Protein arginine N-methyltransferase 37 179 - -
Phac6g00024 607 FunFam Protein arginine N-methyltransferase 7 370 517 - -
Phac6g00024 607 Gene3D - 521 607 - -
Phac6g00024 607 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 352 IPR025799 GO:0016274|GO:0018216
Phac6g00024 607 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 358 607 IPR025799 GO:0016274|GO:0018216
Phac6g00024 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 365 IPR029063 -
Phac6g00024 607 Gene3D - 180 365 - -
Phac6g00024 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 599 IPR029063 -
Phac6g00024 607 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 14 338 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00024 Phac-Chr6 380497 386729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00024 22 183 C2H2 Transcription Factor Family AT3G12270 28.655 8.16e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00024 K11438 - gmx:100785846 1084.71