Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00012 ATGTGGTTAATAAACTATCATTATACTGATAAGCGGATGATGTCTTTGGATGTGGTTGCAGAAACCAATGATCCGCAAAACTCCAGGGTAATTATTTTCTCTAATTACAGAGAAAGTGTCAGGGATATAATGAATGCACTTGAAGATATTGGGGAATTAGTTAGAGCTACCGAGTTTATTGGTCAAAGTTCAGGGAAAACAATGAAAGGTCAGTCCCAAAAGGTTCAACAGGCTGTGCTGACGGTATGTATTCTCTTTAGTATAAGATTCACACTCCTTCTATGCGCTTACATGGTTGATCAACAGAAATTTCGGTCTGGCGCCTATAATGTCATTGTTGCAACATCAATTGGCAAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAGCATGATGGACGATTATTACTAGTTTTTGCTTGTGAAGGGTCTGAGTTGAAGGGCTACTTGCGAAAAGAGGCAAAGAGCAAAACTATAAGTAGACACATGCGCAATGGGGGCATAAATAGCTTTTCCTTTCATCCTAGTCCAAGGATGGTCAGAAACTGTCAGATAGCTTCCTTTCTTTTTTTGTTTGTGCTTTTTATCCTTACCAATGTTACTAAATATTTTTGTAGATTCCTCATGTCTTCAAACCAGAAGTTCAATATGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCAAAAAAAAGAATGTGAAGGAGGATGACAAGCTCCACATTTCTCCATCGAAGGGAAAACTCACTGTGGCTGAAATCAATTTACTTGAAACATATTTTCAGCCGACTGGAGAAAACATCTGTAGAACGTCTCTTATTGCCTTTCCCCACTTTCAGACCTTTCCTTCTAGAGTGCATAAGGTGAAGCATTCATCTGGAACATTGATGCTTATAGACATGATGCAGCGTTTGCAAGGGCTAGCATCATTTCCAAAAGATGAAGAAACTTCTTCACTTCGGGAAGATCTGTGCTTGGGACATAGTAAGCCAGTCACCAGTACCAAACTTGATAAAGCTAATATGGACAATGAATCATGCTCTAGGCATGCAATGAGAATGAGTGTAGTCTCAGTTAATTGTCTGGACCTGGATTCATGTCATGTGGGCATTCAAAGCAAAGACTTCGTTGATCCAACTTGGGAAGAAGAAACATGTGAGGGTGATGAGGCAATTCCTGAGACTCCAATTTTTAAGAGAAGTGTGTCAAATGAAGGATATAATGCTGGTGAAATGGTAAATCTTATGGAGCTCGAGACTTCTTCGTTGGTTGCAGATGCATGCATTAATGGCATGAAAGATGAAGAACTTAGTCCACGTTTAACGAATTTGATTAAAAGTGGTGTAGTTCCGGAGTCTCCCATTGATGAAAGAGGGAAATCAGGATACCATTCTGTCATACGTGACTATATTTTACCTGTCAGTGTCCACAAAGAACAGAATGTCAATTCTTTAAGATCTAGGGAAACTCAAATGGTTGACAATGATAAGGGCACCGATAAGGATTTCTGTACTTACTCTGTCAATGAAACTCAAAGCCCCTTACTTGACCTGAAGAATTGTATCATTAGAAGAGGACGAGTCTTCCTTTCTCAAACTGAGGAAGGCCATATACATAACTCTGACCAAAGCCTCAGTGAAGAAGCACTTCCAGCAGATTGTGGTGAAATGTCTGAAAGCATTAAACCTGCACGCAGATTTAAAAGGTTGCGAAAAGCTGAAGATACTGAAAGCAATAGGGATCAGAAAAATAATTCAACAGTGAACTTTCTCAAGTCATCTTATGCCTCCAATCCCGCACAATATAAGCATGGACGAGGTAAAAGAAAATCAACATACAATGTGAGAGACTTCATTGAGGAGGAAGCTGAGTAA 1938 0.3932 MWLINYHYTDKRMMSLDVVAETNDPQNSRVIIFSNYRESVRDIMNALEDIGELVRATEFIGQSSGKTMKGQSQKVQQAVLTVCILFSIRFTLLLCAYMVDQQKFRSGAYNVIVATSIGKEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRLLLVFACEGSELKGYLRKEAKSKTISRHMRNGGINSFSFHPSPRMVRNCQIASFLFLFVLFILTNVTKYFCRFLMSSNQKFNMLSCPLRNLFLVKKKNVKEDDKLHISPSKGKLTVAEINLLETYFQPTGENICRTSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRLQGLASFPKDEETSSLREDLCLGHSKPVTSTKLDKANMDNESCSRHAMRMSVVSVNCLDLDSCHVGIQSKDFVDPTWEEETCEGDEAIPETPIFKRSVSNEGYNAGEMVNLMELETSSLVADACINGMKDEELSPRLTNLIKSGVVPESPIDERGKSGYHSVIRDYILPVSVHKEQNVNSLRSRETQMVDNDKGTDKDFCTYSVNETQSPLLDLKNCIIRRGRVFLSQTEEGHIHNSDQSLSEEALPADCGEMSESIKPARRFKRLRKAEDTESNRDQKNNSTVNFLKSSYASNPAQYKHGRGKRKSTYNVRDFIEEEAE* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00012 645 MobiDBLite consensus disorder prediction 603 621 - -
Phac6g00012 645 Pfam Helicase conserved C-terminal domain 26 152 IPR001650 -
Phac6g00012 645 MobiDBLite consensus disorder prediction 592 645 - -
Phac6g00012 645 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 17 80 - -
Phac6g00012 645 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 15 194 IPR001650 -
Phac6g00012 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 168 IPR027417 -
Phac6g00012 645 SMART helicmild6 77 153 IPR001650 -
Phac6g00012 645 Gene3D - 6 188 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00012 Phac-Chr6 230492 238010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00012 102 151 Eukaryotic Initiation Factors Gene Family AT3G13920 40.000 5.94e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00012 K10896 - gmx:100820078 868.226