Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00011 ATGTGGTTAATAAACTATCATTATACTGATAAGCGGATGATGTCTTTGGATGTGGTTGCAGAAACCAATGATCCGCAAAACTCCAGGGTAATTATTTTCTCTAATTACAGAGAAAGTGTCAGGGATATAATGAATGCACTTGAAGATATTGGGGAATTAGTTAGAGCTACCGAGTTTATTGGTCAAAGTTCAGGGAAAACAATGAAAGGTCAGTCCCAAAAGGTTCAACAGGCTGTGCTGACGGTATGTATTCTCTTTAGTATAAGATTCACACTCCTTCTATGCGCTTACATGGTTGATCAACAGAAATTTCGGTCTGGCGCCTATAATGTCATTGTTGCAACATCAATTGGCAAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAGCATGATGGACGATTATTACTAGTTTTTGCTTGTGAAGGGTCTGAGTTGAAGGGCTACTTGCGAAAAGAGGCAAAGAGCAAAACTATAAGTAGACACATGCGCAATGGGGGCATAAATAGCTTTTCCTTTCATCCTAGTCCAAGGATGGTCAGAAACTGTCAGATAGCTTCCTTTCTTTTTTTGTTTGTGCTTTTTATCCTTACCAATGTTACTAAATATTTTTGTAGATTCCTCATGTCTTCAAACCAGAAGTTCAATATGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCAAAAAAAAGAATGTGAAGGAGGATGACAAGCTCCACATTTCTCCATCGAAGGGAAAACTCACTGTGGCTGAAATCAATTTACTTGAAACATATTTTCAGCCGACTGGAGAAAACATCTGTAGAACGTCTCTTATTGCCTTTCCCCACTTTCAGACCTTTCCTTCTAGAGTGCATAAGGTGAAGCATTCATCTGGAACATTGATGCTTATAGACATGATGCAGCGTTTGCAAGGGCTAGCATCATTTCCAAAAGATGAAGAAACTTCTTCACTTCGGGAAGATCTGTGCTTGGGACATAGTAAGCCAGTCACCAGTACCAAACTTGATAAAGCTAATATGGACAATGAATCATGCTCTAGGCATGCAATGAGAATGAGTGTAGTCTCAGTTAATTGTCTGGACCTGGATTCATGTCATGTGGGCATTCAAAGCAAAGACTTCGTTGATCCAACTTGGGAAGAAGAAACATGTGAGGGTGATGAGGCAATTCCTGAGACTCCAATTTTTAAGAGAAGTGTGTCAAATGAAGGATATAATGCTGGTGAAATGGTAAATCTTATGGAGCTCGAGACTTCTTCGTTGGTTGCAGATGCATGCATTAATGGCATGAAAGATGAAGAACTTAGTCCACGTTTAACGAATTTGATTAAAAGTGGTGTAGTTCCGGAGTCTCCCATTGATGAAAGAGGGAAATCAGGATACCATTCTGTCATACGTGACTATATTTTACCTGTCAGTGTCCACAAAGAACAGAATGTCAATTCTTTAAGATCTAGGGAAACTCAAATGGTTGACAATGATAAGGGCACCGATAAGGATTTCTGTACTTACTCTGTCAATGAAACTCAAAGCCCCTTACTTGACCTGAAGAATTGTATCATTAGAAGAGGACGAGTCTTCCTTTCTCAAACTGAGGAAGGCCATATACATAACTCTGACCAAAGCCTCAGTGAAGAAGCACTTCCAGCAGATTGTGGTGAAATGTCTGAAAGCATTAAACCTGCACGCAGATTTAAAAGGTTGCGAAAAGCTGAAGATACTGAAAGCAATAGGGATCAGAAAAATAATTCAACAGTGAACTTTCTCAAGTCATCTTATGCCTCCAATCCCGCACAATATAAGCATGGACGAGGTAAAAGAAAATCAACATACAATGTGAGAGACTTCATTGAGGAGGAAGCTGAGGTATCTTCAGATGCCTATATATCTAATGATGAAGATGGCGAAGATGACAATTCATTTGACAGTTTCATAGATGACAGGACCAACCCTACAGCAGCCAGTCAGCCTGACGCTAGTAGAATGGACATGATGGCAATTTACAGGCGTTCTTTGCTCAGTCAAGCACCGAGTAAGGGAGGGCTTGATTTTCCTGCCACCTTCACTCCTGACCGTGTGACTATGGCAGCAAGTACTAGTGAAAGTGGGGATTCTTCATGGAATCATTTCCATACAGATCCAAACAAACAGGTAGCAAATCGCACTTTGGAATCCGTTAGCATCGACCAGATAACCTCAGAAGCAGTGTTTTCAAGTTGTTGTCCTATGGGAAATGGGACAGAGATAAGAAGTCGCAAACGAAGATTGTCGTTTTACCACTCTGAACACTTCCCAAGTATGAACCTTGAACAAGAATTTGCACTTCAATCAAAGAAAGAAGTGGGGGATGTCGATGCAACTACAGATGTTTTATGTGATGATCAGTTTTATAATGAGCTCGATCTTGACGAGTTGGAGGTGAAAGCAACTTTGCTTCTAAAAGGGAAATTAGATTTGTCCATTCAGAAGCAAGATACGGTCTCTCAATCTCACTCACCCAACCTTGATATTTTTTGTTCTCCTTCATTTGACCTTGGGATATGA 2613 0.4011 MWLINYHYTDKRMMSLDVVAETNDPQNSRVIIFSNYRESVRDIMNALEDIGELVRATEFIGQSSGKTMKGQSQKVQQAVLTVCILFSIRFTLLLCAYMVDQQKFRSGAYNVIVATSIGKEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRLLLVFACEGSELKGYLRKEAKSKTISRHMRNGGINSFSFHPSPRMVRNCQIASFLFLFVLFILTNVTKYFCRFLMSSNQKFNMLSCPLRNLFLVKKKNVKEDDKLHISPSKGKLTVAEINLLETYFQPTGENICRTSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRLQGLASFPKDEETSSLREDLCLGHSKPVTSTKLDKANMDNESCSRHAMRMSVVSVNCLDLDSCHVGIQSKDFVDPTWEEETCEGDEAIPETPIFKRSVSNEGYNAGEMVNLMELETSSLVADACINGMKDEELSPRLTNLIKSGVVPESPIDERGKSGYHSVIRDYILPVSVHKEQNVNSLRSRETQMVDNDKGTDKDFCTYSVNETQSPLLDLKNCIIRRGRVFLSQTEEGHIHNSDQSLSEEALPADCGEMSESIKPARRFKRLRKAEDTESNRDQKNNSTVNFLKSSYASNPAQYKHGRGKRKSTYNVRDFIEEEAEVSSDAYISNDEDGEDDNSFDSFIDDRTNPTAASQPDASRMDMMAIYRRSLLSQAPSKGGLDFPATFTPDRVTMAASTSESGDSSWNHFHTDPNKQVANRTLESVSIDQITSEAVFSSCCPMGNGTEIRSRKRRLSFYHSEHFPSMNLEQEFALQSKKEVGDVDATTDVLCDDQFYNELDLDELEVKATLLLKGKLDLSIQKQDTVSQSHSPNLDIFCSPSFDLGI* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00011 870 MobiDBLite consensus disorder prediction 603 621 - -
Phac6g00011 870 MobiDBLite consensus disorder prediction 648 664 - -
Phac6g00011 870 MobiDBLite consensus disorder prediction 647 681 - -
Phac6g00011 870 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 17 80 - -
Phac6g00011 870 Gene3D - 6 188 IPR027417 -
Phac6g00011 870 MobiDBLite consensus disorder prediction 577 635 - -
Phac6g00011 870 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 15 194 IPR001650 -
Phac6g00011 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 168 IPR027417 -
Phac6g00011 870 SMART helicmild6 77 153 IPR001650 -
Phac6g00011 870 MobiDBLite consensus disorder prediction 580 602 - -
Phac6g00011 870 Pfam Helicase conserved C-terminal domain 26 152 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00011 Phac-Chr6 230492 238010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00011 102 151 Eukaryotic Initiation Factors Gene Family AT3G13920 40.000 9.62e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00011 K10896 - vra:106756418 1221.84