Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02803 ATGGGGGCGCGCTCTGCTTCGGTGGTGCGCGCACCATTCATGATTGTGAAGTTGTGGTTAAGCTTGGGTAAGGGTAACGTAGTTGTATTGGTGTTGACATCAATATTAATATCATCATGCTGGTGCACAACAGCGAAAGCCATGTATTCTGATGCGGAGGCGCTGGTGAAGTTCAAGAAGTCGTTGACAAATACAAGGGCCCTCAAGAGTTGGGATTCAAACACAAACTCAAAGCCACCTTGCTCAGGCAATATTCCCAACTGGGTGGGCCTGTTTTGTTTGAGGGACAAGGTTTGGGGGTTGAGACTCGAGAACATGGGCCTAACAGGAAACATAGACATAATGACTCTGGCTTCAATCCCCGCACTCCGCTCGGTTAGCCTAATGAACAACACCTTTGTGGGTCCCTTGCCTAGCGTCAGGATGCTGCCAAATCTCAAGGCCCTCTACCTCTCTTATAACCATTTCTCAGGACAGATTCCCGACGATGAATTTAAGGGTTTACTTAAATTGAGGAAACTCTATTTGGCCAATAATGAGTTCACAGGTCAAATTCCTTCCTCTCTTGCCACCTTGCCTACTCTAATCGTCCTCAGGCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCAGTTTCAACATCATAATAATAATAATAATACTTTGAAGATTATCAATTTTTCTAACAATGACTTGGAGGGTCCCATTCCGCGTAATCTAATCACCTTCGGCTCCTCCTCATTTAGCGGGAACCCAGGACTATGCGGGGCCCCCCTGACGAATGAGTGCCAAGAGTTAGCCACACCATCCAAAATGCGTCTTCTAAAATCTTTACTAGCTTTCGTGGCGAGTGCACTGGTTCTAGCCATCCTGGTTTTAGTGTTGGTGATATGTCGGTTGAGGTCTCAAAGATCCCAACTGCAACACCACCAAGAACAATCTGCAACAGAAGGCCATAAGGCCTCAGCGTTGCAGGGCCAGGGCCAAGCCTCCAACAAACTCGTTCCTCCCATTTATGTGAAAACTAAAAGCCTAGCGGATCACTATGATGCTAGTCCTAGGCAGGTGTCATCAGGTCATGGTCATGGAAATGCACATTCCAGGAGGGGGGAACAAGGCAAGCTCACATTCCTGAGGCATCAAGATCCCAGGTTTGATTTGCAGGATTTGCTAAAGGCCTCCGCTGAAATTCTAGGAAGTGCAGGATTTGGGTCCTCCTACAAGGCCGTCATTTTAGACGGTTACGCCGTTGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCCCAGAGAGGAGTTCCACGAGCACATGAGAAGACTAGGCAATCTCAACCATCCCAATCTTCTCCCTCTCCTCGCCTATTATTACAGAAAGGAAGAAAAGCTTCTACTCTCTGCCTTTGTTCACAACGGTTGCTTGGCCACTCATCTTCATGGCAATCATAGCTCTCAAAAGCCAGGACTTGATTGGCCAACTCGCTTGAAAATCGTGAAAGGTATAGCTAGGGGTTTGTCTTACCTATACAGTGCACTTCCAAGCGTAATTGTGCCTCATGGTCATCTCAAATCTTCCAACGTGCTTTTGGATAAATCCTTCGAACCCCAGCTCACTGATTATGCCCTCAGTCCCGTCATCAACATCGACCATGCCCAACAAATTATCATGCCTTACAAATCTCCCGAGTATGCTCAACTTGGGCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATTCTGGAGATCTTGACCGGCAAATTCCCTGAGAACTATCTCACACTTAGACATAATACTAATTCTGACATAGCCAGCTGGGTAAATACCATGATTACTGAGAAGCGCACCAGTGACGTGTTTGACGTAGAGATGGGAGGAATCGGAAATTGTAAAGCTGAATTACTCAAACTCTTGAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAACGAAGGCTTGATATCAAGGAAGCTCTTGAGCAAATTGAAGACTTGAAAGAGAGTGAAAACGATGATATTATTGGAGAATACTCCTCCTCTCCCATCACCCCAGAAAGAAATGCTTATAGAGCTGTGTGA 2082 0.4601 MGARSASVVRAPFMIVKLWLSLGKGNVVVLVLTSILISSCWCTTAKAMYSDAEALVKFKKSLTNTRALKSWDSNTNSKPPCSGNIPNWVGLFCLRDKVWGLRLENMGLTGNIDIMTLASIPALRSVSLMNNTFVGPLPSVRMLPNLKALYLSYNHFSGQIPDDEFKGLLKLRKLYLANNEFTGQIPSSLATLPTLIVLRLDSNKFQGQIPQFQHHNNNNNTLKIINFSNNDLEGPIPRNLITFGSSSFSGNPGLCGAPLTNECQELATPSKMRLLKSLLAFVASALVLAILVLVLVICRLRSQRSQLQHHQEQSATEGHKASALQGQGQASNKLVPPIYVKTKSLADHYDASPRQVSSGHGHGNAHSRRGEQGKLTFLRHQDPRFDLQDLLKASAEILGSAGFGSSYKAVILDGYAVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNLLPLLAYYYRKEEKLLLSAFVHNGCLATHLHGNHSSQKPGLDWPTRLKIVKGIARGLSYLYSALPSVIVPHGHLKSSNVLLDKSFEPQLTDYALSPVINIDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNTNSDIASWVNTMITEKRTSDVFDVEMGGIGNCKAELLKLLKIGLSCCEENVERRLDIKEALEQIEDLKESENDDIIGEYSSSPITPERNAYRAV* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02803 693 MobiDBLite consensus disorder prediction 309 329 - -
Phac5g02803 693 Gene3D Phosphorylase Kinase; domain 1 360 467 - -
Phac5g02803 693 Coils Coil 649 669 - -
Phac5g02803 693 FunFam Pollen receptor-like kinase 1 468 676 - -
Phac5g02803 693 Pfam Leucine rich repeat N-terminal domain 50 93 IPR013210 -
Phac5g02803 693 Gene3D Transferase(Phosphotransferase) domain 1 468 681 - -
Phac5g02803 693 SUPERFAMILY L domain-like 39 259 - -
Phac5g02803 693 ProSiteProfiles Protein kinase domain profile. 392 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02803 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 36 669 IPR046959 -
Phac5g02803 693 Pfam Protein tyrosine and serine/threonine kinase 396 661 IPR001245 GO:0004672|GO:0006468
Phac5g02803 693 Gene3D Ribonuclease Inhibitor 48 217 IPR032675 -
Phac5g02803 693 FunFam pollen receptor-like kinase 1 362 467 - -
Phac5g02803 693 SUPERFAMILY Protein kinase-like (PK-like) 396 667 IPR011009 -
Phac5g02803 693 FunFam Nuclear pore complex protein NUP107 48 211 - -
Phac5g02803 693 Pfam Leucine rich repeat 144 205 IPR001611 GO:0005515
Phac5g02803 693 Gene3D Ribonuclease Inhibitor 218 263 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02803 Phac-Chr5 44507333 44510176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02803 26 673 Receptor kinase-like Gene Family AT5G35390 48.109 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac5g02803 PK_Tyr_Ser-Thr 9.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02803 - - pvu:PHAVU_005G185800g 1295.41