Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02800 ATGTTGGTTAAAATGCAAACAAATTGGTTTGTCCCTGTTGCAGTCCCATTCCCAGTGCCACACAAGCTTGAGGGTTGTTTTGTGATGAGTAAGTGCGTGCTATCCACGCATCCTCCCACTCCATTTGAAGTGGGTAATGATAAACCGAGAAGAAGAAGATTAAATTGGCGTTGTGGTTGTGGTTCGGAGGAGGCACAGGCACAGAGACAGGGTCTCTCTGAATCTGAATCTGAATCTGAATCTGAATCTGAACCTGAATCCAAACGGGAATGGGAGGTGCAGGAAGCTCGCTGGGCCATTTCAAGTTATCTCGGAGAATTGGGAGTGTCAGAGGAGGAATCGTTATCCATCTCGTGGAATTGCCCGGGGTATGTGAAGATGTTGGTGGAAGGTGTGAGGGATTTGGATGAGTGGGGGTGGGAGGCAGATAAAGAATTTGTGGAGTTGAGCTTCAAGGACAAGATTCTTCGTGTTGCCGCTCAAAAGGGAGACAAGGGGAAAATTGCCTACTTAGAGACTCTGGGTCTCACTATCTCTTGGTCTATCAACGTCGCCGGATATCTCTCCGCTCACACCCTCCCCTCTCTCATACACAAGGTTACACGCATCAAGCAACTCTTCTTTTCTCCCGTTGATAACGATAACGATCACCACCCCTCGTTGCTCATGAGAAACATTCGCCTCACAATGCGCCACTTGTCAATTTCAATTGACGAAGACCTGCAACGCACTTTCTCCTTTTTCGAAAAGCTTCAAGCAATGCCTGGTGGCCTAAACATCTTAGCTTCCCCAGATGCCGCTTTCTGTTCCTTAATCCAATCCTTCCCTCGTCTCCTTCACTTATCCATAGACAACCATTTAACACACATACTGGATTCTCTCCACAATTTCGGAATCCCCACATCTCGCATCTCAAACATAATACTGGCTTTCCCTCCTCTTCTCTTCTGGAATCTTCAACTCCTGCAAGCTAGACTCCTCACCTTCAAGCAGATTAACGTGGCTGATCAAGATTATGCCAAGTTGCTGCTAAAATATCCTTGGCTTCTGTCGACAAGTTTTCAAGAAAATTATGCGGAGCTCCTTGCTTTTTCGTATTCTATCCAGGTTCCAAAGACACAGATAGACCGTGCAATTGAAAGCCACCCTCATCTATTAAGCTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATCAGTTTGCTAAACTTGGAGTTCGGAAGAAAAAGTTAAATCAGGTTATTGCTAGAAGTCCTCAACTACTACTACGGAAGCCCAAAGACTTTCTACAGATTGTTATGTTGTTTCAAAATATGGATTTAGATAAAGAAACTATTGGAAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTTCCAGCATTAAAAGAACTTTAGAAAGGAAGATTGAATTCCTTTGTAGGGTTGGCGTTCGTAAGACTTTCCTTCCTGGGGTTATCAGAAAGTATCCTGAATTACTTGTTTCTGACATTGACAAAACTTTACATCTAAGGATAATGTACTTGATGAAGTTAGGTCTTTCAGAGGAAGACATTGCATTTATGGTACGTACATTTTCTCCTCTTCTTGGGTACAGTATAGAGGGGGTTCTTAAGCCAAAAATAGAATTCCTTGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGAGTTACCCTCGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTGAAAAGAAGGGACATCAAATGTAGCTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATTTATGGGTATTGGAAGGATGCCCGTCTCTCCTCCCGTGTAA 1839 0.4345 MLVKMQTNWFVPVAVPFPVPHKLEGCFVMSKCVLSTHPPTPFEVGNDKPRRRRLNWRCGCGSEEAQAQRQGLSESESESESESEPESKREWEVQEARWAISSYLGELGVSEEESLSISWNCPGYVKMLVEGVRDLDEWGWEADKEFVELSFKDKILRVAAQKGDKGKIAYLETLGLTISWSINVAGYLSAHTLPSLIHKVTRIKQLFFSPVDNDNDHHPSLLMRNIRLTMRHLSISIDEDLQRTFSFFEKLQAMPGGLNILASPDAAFCSLIQSFPRLLHLSIDNHLTHILDSLHNFGIPTSRISNIILAFPPLLFWNLQLLQARLLTFKQINVADQDYAKLLLKYPWLLSTSFQENYAELLAFSYSIQVPKTQIDRAIESHPHLLSCSTSKLKLMVDQFAKLGVRKKKLNQVIARSPQLLLRKPKDFLQIVMLFQNMDLDKETIGRILARCPEIFASSIKRTLERKIEFLCRVGVRKTFLPGVIRKYPELLVSDIDKTLHLRIMYLMKLGLSEEDIAFMVRTFSPLLGYSIEGVLKPKIEFLVNSMERPVRDVVSYPRYFSYSLEKKIKPRYWVLKRRDIKCSLKDMLGKNDEEFAAEFMGIGRMPVSPPV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02800 612 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 376 406 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 551 582 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 340 371 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 411 441 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 518 550 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 SMART mt_12 482 513 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 Pfam mTERF 291 597 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 PANTHER CGI-12 PROTEIN-RELATED 247 405 IPR003690 GO:0003690|GO:0006355
Phac5g02800 612 FunFam Mitochondrial transcription termination factor family protein 391 604 - -
Phac5g02800 612 Gene3D Transcription termination factor 3, mitochondrial 397 604 IPR038538 -
Phac5g02800 612 MobiDBLite consensus disorder prediction 65 90 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac5g02800 mTERF 1.1e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02800 K15032 - gmx:100802127 850.506