Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02786 ATGCAATTAGCGTCGAATGGCGACAAGGAAGAATGTTCAGAAAGCGAACCCATCTTGAATCACCACCATCTTCATTTGCAACCAACTGGAGAACCCTCCTTTTCCTGTGAAATTATTCCTATTTCTCCCAACCATGATGTCGATCATGATTTACAAAACGTTCGGGTTGATGAGACTTGTAATCTCGTAAATGCAGATCAGCCACAATGCCGAATATGCCTCGATATTGGAGGAGAAGATTTAATTGCCCCATGCCATTGCAAAGGTACGCAAAAGTACGTCCACAGATCATGTCTTGATAATTGGAGATCCACCAAGGAGGGCTTCGCCTTTTCTCACTGTACAGAATGCAGAGCTGTCTTCATATTACGTGCAAATGTCCCACCAGATCGGTGGTGGTTGAGATTAAAATTTCAGTTCCTTGTTGCTAGGGATCATGCATTCATTTTCATAATTGTTCAACTGGTTGTTGCTTTCTTGGGAGTGCTTGTGTACAAATTTTATGGAGACGAACTGAGGGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTCTAGCCATTGTTTTGGTGGGATTGCTCTATGGCTTCTTCATAGCGATAATTTGTGGCCAAAGAATCAATGAACGCCACTACCATGTTCTTGCCAAACAAGAATTGACTAAGGAATATGTGGTAGAAGATCGAGAACATGTAAAGAGTGTGCCTGAACTTGATCCGAGTCACGTGACGGAGCTAAGGATGTTGGGCTTGTACTAG 774 0.4212 MQLASNGDKEECSESEPILNHHHLHLQPTGEPSFSCEIIPISPNHDVDHDLQNVRVDETCNLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKSVPELDPSHVTELRMLGLY* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02786 257 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 190 257 - -
Phac5g02786 257 SUPERFAMILY RING/U-box 65 121 - -
Phac5g02786 257 SMART ringv_2 69 118 IPR011016 GO:0008270
Phac5g02786 257 CDD RING_CH-C4HC3_MARCH 70 118 - -
Phac5g02786 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 122 IPR013083 -
Phac5g02786 257 ProSiteProfiles Zinc finger RING-CH-type profile. 62 124 IPR011016 GO:0008270
Phac5g02786 257 Pfam RING-variant domain 70 117 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02786 Phac-Chr5 44437508 44441338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02786 57 216 C3H Transcription Factor Family AT1G50440 75.625 4.57e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02786 - - vun:114185559 515.768