Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02776 ATGCATTCCACCATCTTCACGAGGTGGTCTCTTTTCTTTTCTTTGTTCTTTTATGCTGTCTCTGCACTCACCTCCGATGGGGTCACCCTGTTGTCACTCATGCGCCGTTGGGCATCTCTGCCTCCTTCCATAACCACCACCTGGCTTGCCTCTGACTCCACTCCATGCTCCTCCTGGGTAGGAGTCCAATGTGACCATGCCCACCATGTCGTCTACCTTAACCTCACAGGTTATCAGATTTCTGGTCAATTGGGTCTTGAAATTGGAAATCTTTCTCGCCTACACTACTTAGACCTGACAGACAACAACCTTAATGGCCTAATACCTCACTCATTACAAAACTTGCACAGCCTCCGGTTTCTCAGCCTTGCTCACAATCAGCTATCTGGTGAAATTCCACATTCCTTGACTCAAATCCCTACACTGCATTTGGTTGATCTATCATATAACATTTTAAACGGGTCCATCCCCACCAGTATTGGGAACATGTCTGAGCTCCTGGAGTTGTATCTTCAGAGTAACCACTTGTCTGGGACAATTCCTTCTTCCATTGGGAATTGCAGTAAATTACAAGAATTGTTTTTGGATAGGAATGAGTTGGAGGGTATCCTGCCTCAGAGTCTGAATAATCTCAATCATTTGGCTTATTTTGATGTGGCCAAGAATAGACTTACGGGTACAATTTCTTTGGGTTTCAGTAGTTGTCAAAATTTAGTATTTTTGGATCTCTCATTCAATGACTTTAGTGGTGGCCTTCCCTCAAGCATGGGAAACTGTAGTAGTTTATCGCAACTTGTTGCTGTGAACTGCAATTTGGTTGGGAATATTCCGCCCTCCTTTGGTCTACTCACCAAGCTTTCTACACTATACCTTCCAGAAAACCATTTATCTGGAAGAATACCTCCAGAAATTGGAAACTGCAAGTCTCTGACAGAGTTACAACTGTATTCCAATCGACTTGAGGGAAACATTCCGAGTGAATTGGGAAAACTGAGAAAACTGGTGGACTTGGAATTGTTTTCAAATCAATTGAGTGGTGAAATTCCACTCAGCATCTGGAAGATTAAGGGTCTTGAGTGTCTGCATCTGTATAATAATAGTCTTTCTGGAGAATTGCCATTGGAGATTGCAGAACTCAGGCAGCTGAAGAACATCTCGTTGTTTAACAACCAGTTTTCCGGTGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTAGTTCTATTGGACTTCACAAGTAATAAATTCACTGGCAACATCCCACCAAATCTGTGTTTTGGCAAGAAGTTAAAGATCCTGACTTTGGGTATGAATCAACTTCAAGGTAGTGTACCTTCTGATCTTGGGAGCTGTACAACCCTTACAAGATTAATCCTCAAACAAAATAATTTTACTGGGCCTCTTCCTCATTTTAAGAGCAGCCAAAATCTCGTTTATATGGATATTGGCAACAACAAAATTCATGGAGCAATTCCATCAAGTTTGGGAAATTGCAGACGTATCACAGACTTGATTTTGTCCATGAACAAATTTACAGGGCCCATACCCTCAGAGCTAGGGAACCTAGTGAATCTTCGAACTTTGAATCTCGCTCACAACAACTTAGAAGGTCCTTTGCCCTCTCAGCTATCAAAGTGCACCAAAATGGACAGGTTTGATGTGGGGTTCAATCTCCTAAATGGTTCATTGCCATCAAGTCTGCAGAACTGGACAAGGCTAACCACATTAATTATAAGCGAGAATCACTTCAGTGGGGGCTTCCCATCTTTTCTGTGGGAATTTAAAATGATTTCTGAGCTACAACTTGGTGGCAATCTGTTTGGAGGCAAAATTCCCATATCGGTTGGAGCAATGCCGGAAGTGATCTATGATTTGAATCTAAGTTCAAATTTGTTGACAGGTGAAATTCCTGTAGAGATTAGGAACTTGAAAATGTTGCAAACACTGGATCTGTCTCAGAACAATTTGACAGGAAGCATAGAAGTTCTTGGAGAACTCATCTCCTTAGTGGAACTCAATATTTCTTACAATTCTTTCCGTGGTCCTGTACCAAAGACGTTGATGAAGTTGCTTAATTCTCCCTTGTCATCATTCCTTGGCAATCCTGGCCTATGCATCAGATGTTCAGCCTCAGATGGCCCGGCTTGCTCCGAAAGAAGCTCTATAAAATCATGTGATGACAAATCTAGTGAACAGAAAGGCTTCAGTAAAGTTGAAATTGTGATGATAGCTCTTGGATGCGCCATATTTGTTGTTTTGTTGTTGCTGGGAGTATTTTGTATTGTTTTTGGCAGAACAGCTAAGCAGGAAAACCATATCTCTACTGAACAGGGTTCTTCATCCCTTCTTAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATCGGTATATTATTGGTAGAGGAGCCCATGGAATTGTTTACAAAGCTCTGATGGGTCCAGACAAAGCTTTTGCTGTGAAAAAGATAGGATTTGCTGCGAGCAAAGGGAAGAACTTGAGCATGGTGAGAGAAATTCAGACCCTTGGGAAAGTTAGGCATCGAAATCTGGTCAAATTGGAAGAATTTTGGATTAGAAAAGAGTGTGGTCTAATTTTGTACAGCTACATGGCAAATGGAAGTCTCCATGACCTTTTGCATGAAAGGACACCGGCACCAACCTTAGAGTGGAATGTCAGGTATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCACTATGACTGTGACCCTCCCATAGTGCACAGAGACATCAAGCCCAGCAATATACTTCTGGACTCTGATATGGAGCCTCACATTGCTGACTTTGGAATTGCCAAACTTCTGGAACAGTCTTCTTCTGCTTCAAATACTTCCATTTTTGTGCCGGGTACAATTGGTTATATTGCTCCAGAGAATGCTTATACAACAACAAATAGTAGGGAGTCTGATGTGTACAGTTATGGGGTTGTTCTGCTTGAGCTGATAACCAGAAAGAAGGCAGTAGCAGATCCTTCGTACTTGGAGGGTGGTGTTGTGGTGGATTGGGTTAGATCTGTGTGGAGGGAAACAGGAGAAATTCATCAAATTGTTGATTCATTTCTTTCAGACCAATGTGTAGATACCCATATAATGGAAAACGTTACCAAAGTGCTTATGGTTGCTTTGAGATGTACTGAGAATGATCCACACAAGAGACCCAAAATCAGAGATGTTATTAATCAATTATCAGATGCTGATCCACAGACAAGAAGCACAAAGGGTATCTAA 3255 0.4172 MHSTIFTRWSLFFSLFFYAVSALTSDGVTLLSLMRRWASLPPSITTTWLASDSTPCSSWVGVQCDHAHHVVYLNLTGYQISGQLGLEIGNLSRLHYLDLTDNNLNGLIPHSLQNLHSLRFLSLAHNQLSGEIPHSLTQIPTLHLVDLSYNILNGSIPTSIGNMSELLELYLQSNHLSGTIPSSIGNCSKLQELFLDRNELEGILPQSLNNLNHLAYFDVAKNRLTGTISLGFSSCQNLVFLDLSFNDFSGGLPSSMGNCSSLSQLVAVNCNLVGNIPPSFGLLTKLSTLYLPENHLSGRIPPEIGNCKSLTELQLYSNRLEGNIPSELGKLRKLVDLELFSNQLSGEIPLSIWKIKGLECLHLYNNSLSGELPLEIAELRQLKNISLFNNQFSGVIPQSLGINSSLVLLDFTSNKFTGNIPPNLCFGKKLKILTLGMNQLQGSVPSDLGSCTTLTRLILKQNNFTGPLPHFKSSQNLVYMDIGNNKIHGAIPSSLGNCRRITDLILSMNKFTGPIPSELGNLVNLRTLNLAHNNLEGPLPSQLSKCTKMDRFDVGFNLLNGSLPSSLQNWTRLTTLIISENHFSGGFPSFLWEFKMISELQLGGNLFGGKIPISVGAMPEVIYDLNLSSNLLTGEIPVEIRNLKMLQTLDLSQNNLTGSIEVLGELISLVELNISYNSFRGPVPKTLMKLLNSPLSSFLGNPGLCIRCSASDGPACSERSSIKSCDDKSSEQKGFSKVEIVMIALGCAIFVVLLLLGVFCIVFGRTAKQENHISTEQGSSSLLNKVMEATENLNDRYIIGRGAHGIVYKALMGPDKAFAVKKIGFAASKGKNLSMVREIQTLGKVRHRNLVKLEEFWIRKECGLILYSYMANGSLHDLLHERTPAPTLEWNVRYKIAVGIAHGLAYLHYDCDPPIVHRDIKPSNILLDSDMEPHIADFGIAKLLEQSSSASNTSIFVPGTIGYIAPENAYTTTNSRESDVYSYGVVLLELITRKKAVADPSYLEGGVVVDWVRSVWRETGEIHQIVDSFLSDQCVDTHIMENVTKVLMVALRCTENDPHKRPKIRDVINQLSDADPQTRSTKGI* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02776 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Phac5g02776 1084 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Phac5g02776 1084 ProSiteProfiles Protein kinase domain profile. 793 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02776 1084 Pfam Leucine rich repeat 90 128 IPR001611 GO:0005515
Phac5g02776 1084 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Phac5g02776 1084 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Phac5g02776 1084 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 428 714 - -
Phac5g02776 1084 Gene3D Phosphorylase Kinase; domain 1 763 869 - -
Phac5g02776 1084 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 761 869 - -
Phac5g02776 1084 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 23 179 - -
Phac5g02776 1084 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 333 1071 - -
Phac5g02776 1084 SUPERFAMILY RNI-like 73 430 - -
Phac5g02776 1084 Pfam Protein kinase domain 798 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 621 695 IPR032675 -
Phac5g02776 1084 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 326 424 - -
Phac5g02776 1084 PRINTS Leucine-rich repeat signature 94 107 - -
Phac5g02776 1084 PRINTS Leucine-rich repeat signature 643 656 - -
Phac5g02776 1084 SMART LRR_typ_2 91 114 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 283 307 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 163 187 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 115 139 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 522 546 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 643 666 IPR003591 -
Phac5g02776 1084 SMART LRR_typ_2 188 210 IPR003591 -
Phac5g02776 1084 SMART serkin_6 793 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 558 620 IPR032675 -
Phac5g02776 1084 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Phac5g02776 1084 SUPERFAMILY Protein kinase-like (PK-like) 779 1071 IPR011009 -
Phac5g02776 1084 ProSitePatterns Protein kinases ATP-binding region signature. 799 822 IPR017441 GO:0005524
Phac5g02776 1084 SUPERFAMILY RNI-like 385 693 - -
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Phac5g02776 1084 FunFam Serine/threonine-protein kinase-like protein CCR4 870 1083 - -
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 267 370 IPR032675 -
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 371 469 IPR032675 -
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 182 266 IPR032675 -
Phac5g02776 1084 Gene3D Ribonuclease Inhibitor 470 557 IPR032675 -
Phac5g02776 1084 Gene3D Transferase(Phosphotransferase) domain 1 870 1082 - -
Phac5g02776 1084 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 237 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02776 Phac-Chr5 44349252 44353083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02776 14 1080 Receptor kinase-like Gene Family AT1G73080 50.906 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac5g02776 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02776 - - gmx:100778035 1709.12