Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02773 ATGGGTCCGGTGGAGGAGAAGATAGAGCGCGATCCTTTCGACAACCTCGAGGATGCTGACCACACTGCCTTCGCCTCCTCCCCATCCGCCTCCAAAGTCCGTCCCTTCAATTTCGAGACCACCGTTGTTGATTTCCGGAGCTCCTCCGCCTTCAACATTAGACGCATGAGCAGGAGTATATACTTTGTCTTAATCAAGGCCAAGATCAACATCTTGCTTCCCTTTGGTCCATTCGCCATTTTACTTCATTATCTCACCGGACACCATGGATGGGTCTTCTTCTTCACCTTATTGGGTATTGCTCCTTTGGCCGAACGTCTCGGTTATGCCACCGAGCAGCTTGCGTTCTACACGGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTTGGGAATGCAACTGAAATGATTATATCAATTTACGCATTGAAAAGCAATATGATAAGGGTTGTTCAGCAATCTTTGCTAGGTTCTATCCTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTTACTGGTGGCATTGCCCACTACCAAAAAGTACAGGTTTTTGATAAGGCTGCTGCCGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATCCTGTTTCCTGCTGTGCTTTACTTTACTCACTCAGAAGTTCATGAAGGGAAGTCAGTGTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTGGTGGCGTATGCAAGCTACCTTTTCTTTCAACTTGGAAGTCGGCAAAATGTTTATAGTCCAGTTAATGAGGAAGGAGATAATGGTGAAAATTCTGATGAGGAAGAAGAGCTTGAATTAACTCAATGGGAGGCAATAGCCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGATGCGCTACAGGGTGCATCTGAGTCATTAAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAACGCTGCAGAACATGCCAGTGCCATAATGTTTGCCGTAAAGGACAAGCTTGATATTACTATTGGAGTTGCCATTGGATCGTCTACACAGATATCTATGTTTGTGATTCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACGCTTTTTATCACCGTGTTGGTAGTTGCATTTATGATGCAGGTATTGATTTCTTACCTCTAA 1215 0.4412 MGPVEEKIERDPFDNLEDADHTAFASSPSASKVRPFNFETTVVDFRSSSAFNIRRMSRSIYFVLIKAKINILLPFGPFAILLHYLTGHHGWVFFFTLLGIAPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIAHYQKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHEGKSVLSLSRFSSCIMLVAYASYLFFQLGSRQNVYSPVNEEGDNGENSDEEEELELTQWEAIAWLAILTAWVSILSGYLVDALQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQVLISYL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02773 404 Pfam Sodium/calcium exchanger protein 280 396 IPR004837 GO:0016020|GO:0055085
Phac5g02773 404 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016020|GO:0055085
Phac5g02773 404 FunFam Vacuolar cation/proton exchanger 120 259 - -
Phac5g02773 404 FunFam Vacuolar cation/proton exchanger 267 404 - -
Phac5g02773 404 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 47 398 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac5g02773 404 Gene3D - 120 256 IPR044880 -
Phac5g02773 404 Gene3D - 267 402 IPR044880 -
Phac5g02773 404 NCBIfam calcium/proton exchanger 63 398 - -
Phac5g02773 404 NCBIfam calcium/proton exchanger 72 396 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02773 Phac-Chr5 44337063 44346521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02773 58 398 Antiporters AT3G13320 73.977 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02773 K07300 - gmx:100806000 651.744