Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02766 ATGGATAAAGTTTGTCTGAACAGTGAGGGTGTAGGAGATGAAGAAGGCGATGTCCCTGTTGCTCCTGTGGTTGGGATGGAATTTGAGAGTTACGAGGATGTCTATTACTTCTATAATTGGTATGCCAAGGAACAGGGATTTGGGGTTAGGGTCACAAATACCTGGTACCGCAAGACTAAGGAACGTTACAGAGCAAAACTTAGCTGCAGCAGCGCAGGCTTCAAGAAAAGAACCGAAGCTAATCGCCCCAGACCCGAAACCAGAACTGGTTGTCCTGCTATGATCAAGTTCAGGTTGATGGATTCCACAAGATGGAGAATTATTGAAGTTGAGCTTGACCACAACCACTTGATCAACCCCACCAGTGCCAAGTTTTACAAGTCCCATAAGCAAGTTGCTCTTGGCACCAAAAGAACCTTCCACTTAGATGCTGCTGCTGCTCAACAGGTTCACAAAATTAGGATGTTTCGAACTCTCATAGTCGATGCTGAGGATGATGCTAGTGTGCATCCTGATGAAGGGGAATCCCCAAAAGGCCTCTACCCCAACAGTCAGTTGAAGCTGAAGAAAGATTTGGATTCAAAATCTTGCAGCTTTGTACCAAAATCGAGGTCTTACTTTGAGTTGCAGGTTTCAAAGTTATATACCAATGAAATATTAAGAATGTTTGAAAGGGAAGTGGAAGGGATGTTTTCTTGCTTTAACTCAAGACGGATAAATGTTGATGGAGCGGTGATCACCTACATTGTGGAAGAACAAGTTGAAGTTGAGGGAAATCAGAGAGGTGCAAGAGATTATGAGGTGTGTTATAATGAAGCTGAAATGGAGGTGTTTTGCATCTGTGGTCTGTTCAATTTCAGAGGTTGGTTGTGCAGGCATGCTTTATTTATTTTGAGCCAAAATGGGATAAAAGAGATCCCTGCTCAGTACATTGTTTCACGGTGGAGAAAAGATGTGAAGCGTAGCAGCGTTTATGATCACAACTGTAGTGGCATTGATATAAGTAATCCAGTTCATAGGTATGATCATTTGTACAAACAGATTGTAAAGGTTGTAGAGGAAGGTAAGAAATCTGATGATCATTACAGGACTGCACTACAAGCAATGGAAAATATATTGAGGAAGCTTCATATTCTAAACGTTGAGGATCCTCACAAACTAATGTACTAG 1170 0.4188 MDKVCLNSEGVGDEEGDVPVAPVVGMEFESYEDVYYFYNWYAKEQGFGVRVTNTWYRKTKERYRAKLSCSSAGFKKRTEANRPRPETRTGCPAMIKFRLMDSTRWRIIEVELDHNHLINPTSAKFYKSHKQVALGTKRTFHLDAAAAQQVHKIRMFRTLIVDAEDDASVHPDEGESPKGLYPNSQLKLKKDLDSKSCSFVPKSRSYFELQVSKLYTNEILRMFEREVEGMFSCFNSRRINVDGAVITYIVEEQVEVEGNQRGARDYEVCYNEAEMEVFCICGLFNFRGWLCRHALFILSQNGIKEIPAQYIVSRWRKDVKRSSVYDHNCSGIDISNPVHRYDHLYKQIVKVVEEGKKSDDHYRTALQAMENILRKLHILNVEDPHKLMY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02766 389 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 189 377 IPR031052 GO:0006355
Phac5g02766 389 SMART 26again6 277 304 IPR006564 GO:0008270
Phac5g02766 389 Pfam FAR1 DNA-binding domain 37 119 IPR004330 -
Phac5g02766 389 Pfam SWIM zinc finger 272 299 IPR007527 GO:0008270
Phac5g02766 389 ProSiteProfiles Zinc finger SWIM-type profile. 266 302 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02766 Phac-Chr5 44306196 44308154 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phac5g02766 FAR1 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02766 - K17604 gmx:100796267 348.206