Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02765 ATGAAGAAGACGAATGAGTTTTCAGTTTCAACCACACGCACTTACAGTTCTCTCTATTTGAATCCTCTGAACCACCCCACCCACTGCCGGAGCTACAGCTCCGACTATGTCCCCAAACCTCACTTTGAATTTCAGGATCACCACCCCGACAAGGAAAACCAAGATGCCAATGCCACCATGCCCAAGCCCTTCAGGTCTCTCTCCACTCACAGGATCTTCAAGCCCTCCTCCCTTCAATTCTGCATGCAAATGAACAACCTTCAAACCTCCCTCAACATTTGGGACTACTCTGATTCCGAGTCAGCTCCTGCTTCCTCTTGGTCCACACTGCCCAACAAGTACTTGATCTGTAGACCCTTGCCATTAGATGTTGGAAGGTGCAGTTGTTTTATTCTCAAGGAGCCAACGCCCCATGGAATTTCAGGGGGCAATTTCTTCTCTCTTTATACCAATGAAGGCCAGGGAAGGCAGAACAGGAAACTAGCTGTGGCCCTCCACAAACGGCGGAATGGGAGGTCTTACTTCACCATTGCTCAGAATGTAAAAGGACTGCTCTCCCATTCTGATGATACTTTTCTTGGCACTGTAACAGCTAACCTCATGGGCTCAAAATACCACATTTGGGATCAGGCATATCGTCATAATTCCTGTGCTGAACAACCAAAGCCACCTCTTGCTGTTGTGAGCAGCTACATACCTACCATAACAACATGTACAGGAAGTCACAGAAGCATGAGGGCGTATGTACCCAAGCATCAATACATGCCACTGAAGAACACAACCCAGGTACAACATGTAAAAGGATTGCCAATGAAGTGGGAGGGAAAGCTGGACAAAGTCCATCAACTGTTCTCAAAGGCTCCACTTTACAACAAGATTTCAAAGCAATATGAGCTTGACTTTAGAGATAAAGGAAAGACGGGCCTCAAAATCCAAAGATCGGTTAAAAATTTTCAGCTAACTTTAGAGGAGAATGGGAGTCAGACGATACTGCAGCTAGGGAGGGCAGGAAAATCAAAATTCGTTATGGACTACAGGTACCCTTTGACAGGTTACCAGGCGTTTTGCATGTGCTTGGCTTCAATGGATGCAAAGCTTTGTTGCACAGTGTAA 1113 0.4618 MKKTNEFSVSTTRTYSSLYLNPLNHPTHCRSYSSDYVPKPHFEFQDHHPDKENQDANATMPKPFRSLSTHRIFKPSSLQFCMQMNNLQTSLNIWDYSDSESAPASSWSTLPNKYLICRPLPLDVGRCSCFILKEPTPHGISGGNFFSLYTNEGQGRQNRKLAVALHKRRNGRSYFTIAQNVKGLLSHSDDTFLGTVTANLMGSKYHIWDQAYRHNSCAEQPKPPLAVVSSYIPTITTCTGSHRSMRAYVPKHQYMPLKNTTQVQHVKGLPMKWEGKLDKVHQLFSKAPLYNKISKQYELDFRDKGKTGLKIQRSVKNFQLTLEENGSQTILQLGRAGKSKFVMDYRYPLTGYQAFCMCLASMDAKLCCTV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02765 370 Pfam Tub family 118 363 IPR000007 -
Phac5g02765 370 SUPERFAMILY Tubby C-terminal domain-like 104 369 IPR025659 -
Phac5g02765 370 PANTHER TUBBY-RELATED 81 367 - -
Phac5g02765 370 Gene3D Tubby Protein; Chain A 108 369 IPR025659 -
Phac5g02765 370 PRINTS Tubby superfamily signature 192 216 IPR000007 -
Phac5g02765 370 PRINTS Tubby superfamily signature 347 369 IPR000007 -
Phac5g02765 370 PRINTS Tubby superfamily signature 306 322 IPR000007 -
Phac5g02765 370 PRINTS Tubby superfamily signature 326 345 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02765 Phac-Chr5 44302078 44304520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02765 64 263 TUB Transcription Factor Family AT1G16070 53.182 8.68e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Phac5g02765 Tub 1.1e-38 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02765 K19600 - gmx:100803500 520.776