Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02763 ATGAGCTCCAATGGCCTGAACGTGGAAAGTGGCATCATGAAGAACATGAAGATGAAGAAGAAGAAGAAGAAGCTTCCAAGAGACACCCCCTTGCGACGAACCTCACCCTACAGGGGTGTTACCAGGCATCGATGGACAGGTCGATACGAGGCTCATCTCTGGGATAAGACTTCCTGGAATCAATCGCAGAACAAGAAAGGAAGACAAGTATATCTCGGGGCATACGACGATGAAGATGCTGCAGCACGTGCGTATGATTTGGCAGCATTGAAGTATTGGGGTTCGGAAACCCTCCTCAATTTCCCCGTATCGAATTATGAAGAGCAGCTTAAGGAGATGGAGGATCAATCCAAGGAAGAGTATATCGGATCCTTAAGAAGAAAAAGTAGCGGCTTCTCTCGTGGAGTCTCCAAATTTAGAGGCGTAGCAAGACACCATCAGAATGGAAGATGGGAAGCACGAATTGGCAGAGTGTTGGGCAATAAATATCTATACCTTGGAACTTACGGTACAGAAGAAGAAGCAGCGATGGCGTACGATTTGGCGGCCATAGAGTACCGTGGACTTAATGCTGTTACCAACTTTCACCTCAGTCGTTATATGAAAGGGCTACGTCCCAAAGACCAACCTCAAGCCCACCATGCCAGCCCAAGCCCAACTACACTTTCTGGATCTGAATCTTGCTGCAATGCCACCGCAACATTGGGCCCTCCACAGCCACCGCCTCCACCTTCTTCACCCTCCACCTCAAATCCTCCTCCTCCTCCTCCTCGCACATTCCCTGAAGATATTCAAACCTTTTTCGAAACTCAAGATTCAGCTGGAATCTACACAGACACTGATGACATTATATTTGGCGACTTGACCTCCATTGCCTCACCAATTTTTCATTGTGACCTTAATGCTTAA 909 0.4763 MSSNGLNVESGIMKNMKMKKKKKKLPRDTPLRRTSPYRGVTRHRWTGRYEAHLWDKTSWNQSQNKKGRQVYLGAYDDEDAAARAYDLAALKYWGSETLLNFPVSNYEEQLKEMEDQSKEEYIGSLRRKSSGFSRGVSKFRGVARHHQNGRWEARIGRVLGNKYLYLGTYGTEEEAAMAYDLAAIEYRGLNAVTNFHLSRYMKGLRPKDQPQAHHASPSPTTLSGSESCCNATATLGPPQPPPPPSSPSTSNPPPPPPRTFPEDIQTFFETQDSAGIYTDTDDIIFGDLTSIASPIFHCDLNA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02763 302 ProSiteProfiles AP2/ERF domain profile. 36 102 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 SUPERFAMILY DNA-binding domain 35 104 IPR016177 GO:0003677
Phac5g02763 302 Pfam AP2 domain 37 94 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 Pfam AP2 domain 137 188 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 MobiDBLite consensus disorder prediction 213 234 - -
Phac5g02763 302 FunFam AP2-like ethylene-responsive transcription factor 35 104 - -
Phac5g02763 302 CDD AP2 137 195 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 SMART rav1_2 36 108 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 SMART rav1_2 138 202 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 PRINTS Ethylene responsive element binding protein signature 84 104 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 ProSiteProfiles AP2/ERF domain profile. 138 196 IPR001471 GO:0003700|GO:0006355
Phac5g02763 302 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 219 - -
Phac5g02763 302 MobiDBLite consensus disorder prediction 206 263 - -
Phac5g02763 302 MobiDBLite consensus disorder prediction 235 261 - -
Phac5g02763 302 SUPERFAMILY DNA-binding domain 137 198 IPR016177 GO:0003677
Phac5g02763 302 Gene3D AP2/ERF domain 137 197 IPR036955 GO:0003700|GO:0006355
Phac5g02763 302 Gene3D AP2/ERF domain 36 104 IPR036955 GO:0003700|GO:0006355
Phac5g02763 302 FunFam AP2-like ethylene-responsive transcription factor 137 198 - -
Phac5g02763 302 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02763 Phac-Chr5 44298542 44301752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02763 32 235 AP2-EREBP Transcription Factor Family AT5G57390 62.326 1.24e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac5g02763 AP2 2.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02763 K09285 - gmx:100807781 374.785