Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02762 ATGAGCTCCAATGGCCTGAACGTGGAAAGTGGCATCATGAAGAACATGAAGATGAAGAAGAAGAAGAAGAAGCTTCCAAGAGACACCCCCTTGCGACGAACCTCACCCTACAGGGGTGTTACCAGGCATCGATGGACAGGTCGATACGAGGCTCATCTCTGGGATAAGACTTCCTGGAATCAATCGCAGAACAAGAAAGGAAGACAAGGGGCATACGACGATGAAGATGCTGCAGCACGTGCGTATGATTTGGCAGCATTGAAGTATTGGGGTTCGGAAACCCTCCTCAATTTCCCCGTATCGAATTATGAAGAGCAGCTTAAGGAGATGGAGGATCAATCCAAGGAAGAGTATATCGGATCCTTAAGAAGAAAAAGTAGCGGCTTCTCTCGTGGAGTCTCCAAATTTAGAGGCGTAGCAAGACACCATCAGAATGGAAGATGGGAAGCACGAATTGGCAGAGTGTTGGGCAATAAATATCTATACCTTGGAACTTACGGTACAGAAGAAGAAGCAGCGATGGCGTACGATTTGGCGGCCATAGAGTACCGTGGACTTAATGCTGTTACCAACTTTCACCTCAGTCGTTATATGAAAGGGCTACGTCCCAAAGACCAACCTCAAGCCCACCATGCCAGCCCAAGCCCAACTACACTTTCTGGATCTGAATCTTGCTGCAATGCCACCGCAACATTGGGCCCTCCACAGCCACCGCCTCCACCTTCTTCACCCTCCACCTCAAATCCTCCTCCTCCTCCTCCTCGCACATTCCCTGAAGATATTCAAACCTTTTTCGAAACTCAAGATTCAGCTGGAATCTACACAGACACTGATGACATTATATTTGGCGACTTGACCTCCATTGCCTCACCAATTTTTCATTGTGACCTTAATGCTTAA 900 0.4778 MSSNGLNVESGIMKNMKMKKKKKKLPRDTPLRRTSPYRGVTRHRWTGRYEAHLWDKTSWNQSQNKKGRQGAYDDEDAAARAYDLAALKYWGSETLLNFPVSNYEEQLKEMEDQSKEEYIGSLRRKSSGFSRGVSKFRGVARHHQNGRWEARIGRVLGNKYLYLGTYGTEEEAAMAYDLAAIEYRGLNAVTNFHLSRYMKGLRPKDQPQAHHASPSPTTLSGSESCCNATATLGPPQPPPPPSSPSTSNPPPPPPRTFPEDIQTFFETQDSAGIYTDTDDIIFGDLTSIASPIFHCDLNA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02762 299 MobiDBLite consensus disorder prediction 1 37 - -
Phac5g02762 299 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 216 - -
Phac5g02762 299 MobiDBLite consensus disorder prediction 210 231 - -
Phac5g02762 299 CDD AP2 134 192 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 SMART rav1_2 135 199 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 SMART rav1_2 36 105 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 MobiDBLite consensus disorder prediction 203 260 - -
Phac5g02762 299 Pfam AP2 domain 134 185 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 Pfam AP2 domain 37 91 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 MobiDBLite consensus disorder prediction 232 258 - -
Phac5g02762 299 FunFam AP2-like ethylene-responsive transcription factor 134 195 - -
Phac5g02762 299 FunFam AP2-like ethylene-responsive transcription factor 35 101 - -
Phac5g02762 299 SUPERFAMILY DNA-binding domain 35 101 IPR016177 GO:0003677
Phac5g02762 299 Gene3D AP2/ERF domain 134 194 IPR036955 GO:0003700|GO:0006355
Phac5g02762 299 Gene3D AP2/ERF domain 36 101 IPR036955 GO:0003700|GO:0006355
Phac5g02762 299 ProSiteProfiles AP2/ERF domain profile. 135 193 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 ProSiteProfiles AP2/ERF domain profile. 36 99 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 SUPERFAMILY DNA-binding domain 134 195 IPR016177 GO:0003677
Phac5g02762 299 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Phac5g02762 299 PRINTS Ethylene responsive element binding protein signature 81 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02762 Phac-Chr5 44298542 44301752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02762 32 232 AP2-EREBP Transcription Factor Family AT5G57390 60.930 5.88e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac5g02762 AP2 8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02762 K09285 - gmx:100807781 363.614