Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02754 ATGGTTTTCTCAGAAACCTTGTTCTTCCTTTTACTTGTAACATTTGGTCACTCCTTTCAAAGCCGCCACCACCCTTCTCATTCTTTGCTCACCGATAGAGCTGCGCTTCTGGAATTCAGAAAAACAATCGTATCAGACCCTCTTTCCTCACTTGCAAACTGGGATGAAGCAGTTCCTGTCTGCAACTTCACGGGTGTTCAATGTGACACATCCCATAACCGTGTTACACGACTCATCCTATATGATAAACCTCTTCTGGGGCCTCTTTCACCTGTTCTTTCCAATCTCACTGGACTGCACAACCTTGAGATTGTTCGCACTCAACTATTTGGCACTATTTCTCCTGAATTTTCCAACCTCAGACGCATTCACTGCATCATTCTTGAGGGCAATAATTTGCATGGCTCAATACCACACTCCTTTTCCATGCTTTCCAAGCTTAACATTCTAGTGATCAAGGAAAATAACATATCAGGTTCGCTTCCTCCATCTCTCTTTTCCAACTGCACTCTGCTAAATGTTGTGGACTTCTCCAGCAACACATTAAGTGGTCAAATCCCTGAAGAGATTGGAAACTGCAAAATCCTGTGGAGTATCAGTTTATACAACAATCAATTTACTGGGCAGCTTCCTCTCTCGCTCACCAATCTATCGCTTCAACATTTAGATGTAGAGTACAATTTTCTATCTGGTGAATTGCCTGCTAAGTTTGTAAGCAGTTGGCCATATCTTCTTTACCTTCATTTATCATACAACAACATGGTAAGCCATGATAGCAACACCAATCTCGATCCATTTTTCACTGCTCTCAGAAACAACAGTAATCTAGAGGAGCTTGAATTGGCAGGAATGGACCTTGGGGGAAGGTTCACAGATACCTTCCCCAGCCAACTCACCAACCTAAGAACCCTGCTACTGCAGGAAAACCAAATTTTTGGATCAATTCCTCGCAGCTTAGCAAACCTTTCTAGTCTTTTCATTCTGAATTTAACATCCAATCTTCTAAATGGAACTATATCCTCAGATATATTCGGATTGCCAAGGTTGGAACAACTTTTCTTATCAGACAACCATTTCAAAATTCCAATTCCAGAAGCAATAGGCAAGTGTCTCAATCTGGGTCTATTGGACCTGTCACACAACCAATTCTCAGGTAGGATTCCAGACAGTTTGGGAAATTTGGTGAGACTAAATTCTTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCCCCCACATTGGGACGGTGCACTAATCTGTACAGGCTTGACTTGTCCCACAATAGATTAACAGGAAGCATCCCACTGAAATTGGCAGGCTTGCATGAGATCAGAATTTTCATAAATGTCTCCCATAACCACCTTGAAGGTGACCTGCCAATTGAGCTCAGCAAATTAGAAAAGGTTCAGGAGATAGATCTTTCCTCCAACTACCTCACTGGAAGTATCTTCCCTCAGATATCAGGATGCATTGCTGTTTCAATGATTAATTTTTCGAACAACTTTCTTCAAGGAGAGCTCCCTCAGTCCCTGGGTGATCTGAAGAACCTTGAATCTTTTGATGTTTCACGAAATCAGTTATCTGGATTGATACCAGCAAAAATTGGGAATCCAAAACTTTGTGGGACAATTGCAGGCATATCCTTGTGCTATCAAAGGAGAAGATGGATTCATGCTCGTTTGTTATTGATTTTATTGATTTTGGTGATCTTCATAGCGACCTTGTTGTCAGTAATTTGCTGTGTAATTGGATGCAAGCGTCTTAAAGTAATCATCAGCTCTCAGAGGACAGAGGCAAGCAAAAATGCAGCTAGAACAGAGTTGATGAGTAACTTCCCAAGAATCTCGTATAAGGAACTGTCAGATGCCACTGGAGGATTTGACAATGAGAGACTTGTTGGATCAGGTAGTTATGGACATGTCTATAGAGGTGTTCTCTTGGAGGGGACACCAATAGCAGTGAAGGTGCTGCATTTGCAATCTGGAAATTCTACCAAGAGCTTCAACAGAGAATGCCAAGTTTTGAAGAGAATTAGACACAGAAATCTTATAAGGATTATTACAGCATGTAGCCTACCCGATTTCAAGGCTCTTGTTCTACCTTATATGGCCAATGGCAGCTTGGAGAGCATCCTCTATCCTTCTTCTGGATCATCATCACACTTGAGTATTGTCCAGCGGGTCAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCATCATTCTCCTGTCAGAGTCATACACTGCGATCTAAAACCAAGCAATTGTCTTCTCAATGATGACATGACAGCTCTCGTCTCTGATTTTGGGGTTGCAAGGCTAATTATGAGTGCAGCAGGTGGGGCTATTGATAATATGGCCAACTCTAGTGCAAATTTGTTCTTTGGATCTGTTGGATACATTGCACCAGAATATGGATTTGGATCCAATTCATCTATCAAAGGAGATGTCTATAGCTTTGGCATTCTAGTTCTTGAGATGGTGACTAGAAGAAGACCAATAGATGACATGTTTGTTGGTGGGTTAAGTCTGCAGAAATGGGTAAAGATTCATTTTCACGGAAGGGTAGAAAAAGTGGTAGATCCTGCTTTGGTGACAGCCTCAAGAAATGAATCCCAAGAGGTTAGAAAGACGTGGGAAGTTGCTATTTCAGAGTTAATCGAGTTGGGACTTCTCTGCACACAGGAGTCACCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGACTTAGATCGTCTCAAGAGATACCTTAATGGGGACACTGCAGGAACTTTTGCCTCGTCTCTAGGAATTTCATCTTCCACTATAGGTGGTGGTGACTGGTGA 2841 0.4196 MVFSETLFFLLLVTFGHSFQSRHHPSHSLLTDRAALLEFRKTIVSDPLSSLANWDEAVPVCNFTGVQCDTSHNRVTRLILYDKPLLGPLSPVLSNLTGLHNLEIVRTQLFGTISPEFSNLRRIHCIILEGNNLHGSIPHSFSMLSKLNILVIKENNISGSLPPSLFSNCTLLNVVDFSSNTLSGQIPEEIGNCKILWSISLYNNQFTGQLPLSLTNLSLQHLDVEYNFLSGELPAKFVSSWPYLLYLHLSYNNMVSHDSNTNLDPFFTALRNNSNLEELELAGMDLGGRFTDTFPSQLTNLRTLLLQENQIFGSIPRSLANLSSLFILNLTSNLLNGTISSDIFGLPRLEQLFLSDNHFKIPIPEAIGKCLNLGLLDLSHNQFSGRIPDSLGNLVRLNSLFLNNNLLSGTIPPTLGRCTNLYRLDLSHNRLTGSIPLKLAGLHEIRIFINVSHNHLEGDLPIELSKLEKVQEIDLSSNYLTGSIFPQISGCIAVSMINFSNNFLQGELPQSLGDLKNLESFDVSRNQLSGLIPAKIGNPKLCGTIAGISLCYQRRRWIHARLLLILLILVIFIATLLSVICCVIGCKRLKVIISSQRTEASKNAARTELMSNFPRISYKELSDATGGFDNERLVGSGSYGHVYRGVLLEGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESILYPSSGSSSHLSIVQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNCLLNDDMTALVSDFGVARLIMSAAGGAIDNMANSSANLFFGSVGYIAPEYGFGSNSSIKGDVYSFGILVLEMVTRRRPIDDMFVGGLSLQKWVKIHFHGRVEKVVDPALVTASRNESQEVRKTWEVAISELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGDTAGTFASSLGISSSTIGGGDW* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02754 946 SUPERFAMILY Protein kinase-like (PK-like) 607 915 IPR011009 -
Phac5g02754 946 Gene3D Ribonuclease Inhibitor 31 146 IPR032675 -
Phac5g02754 946 Gene3D Ribonuclease Inhibitor 147 218 IPR032675 -
Phac5g02754 946 SUPERFAMILY L domain-like 58 359 - -
Phac5g02754 946 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 704 927 - -
Phac5g02754 946 Pfam Protein kinase domain 629 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02754 946 SMART serkin_6 628 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02754 946 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 608 703 - -
Phac5g02754 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Phac5g02754 946 Gene3D Phosphorylase Kinase; domain 1 608 703 - -
Phac5g02754 946 CDD STKc_IRAK 634 918 - -
Phac5g02754 946 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 257 461 - -
Phac5g02754 946 Gene3D Transferase(Phosphotransferase) domain 1 704 928 - -
Phac5g02754 946 FunFam Leucine-rich repeat receptor-like protein kinase 30 188 - -
Phac5g02754 946 Pfam Leucine rich repeat 299 359 IPR001611 GO:0005515
Phac5g02754 946 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Phac5g02754 946 SMART LRR_typ_2 346 370 IPR003591 -
Phac5g02754 946 SMART LRR_typ_2 515 539 IPR003591 -
Phac5g02754 946 SMART LRR_typ_2 298 322 IPR003591 -
Phac5g02754 946 SMART LRR_typ_2 144 168 IPR003591 -
Phac5g02754 946 SMART LRR_typ_2 394 418 IPR003591 -
Phac5g02754 946 ProSitePatterns Protein kinases ATP-binding region signature. 634 656 IPR017441 GO:0005524
Phac5g02754 946 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 449 915 - -
Phac5g02754 946 SUPERFAMILY L domain-like 269 534 - -
Phac5g02754 946 ProSiteProfiles Protein kinase domain profile. 628 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02754 946 Gene3D Ribonuclease Inhibitor 219 550 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02754 Phac-Chr5 44278753 44282652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02754 31 905 Receptor kinase-like Gene Family AT3G47570 34.086 3.62e-152 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phac5g02754 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02754 - - pvu:PHAVU_005G183300g 1722.98