Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02742 ATGGACAACAACGAGGAAATCCCCTCAACACCTGCAACACCAGGCACTCCTGGTGCACCTCTTTTTGGTGGTTTCAACAATGGCAGAAATAGGACTAATAACACTAACAAAAACTCCCTTCTCAAGAGTTGTAGGTGCTTCAGTGTGGAGGATTGGACCATAGAAGATGGAGCCTTACCCGCCGTCTCCTGCTCATTGCCACCCCCTCCTCCTGTCCCTCTTGCAAGAAAGGTTGGTGCCGAGTTCATAGGGACCTTCATTCTCATGTTCGCTGCCACTGCCGCCGCCATTGTCAACCAAAAGACAAACGGCTCTGAGACCCTCATAGGGTGTGCTGCCACCACTGGTCTCGCCGTTATGATCGTCATCCTCGCCACCGGCCACATCTCCGGTGCTCATCTCAACCCTGCTGTCACCCTTTCCTTTGCTGCATTGAAGCACTTCCCCTGGAAGCACGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCTATTTGTGCCGCATTTGCTCTGAAAGGGGTTTACCACCCTTTCATGAGTGGTGGAGTCACTGTTCCTTCAGGAGGATATGCCCAGGCTTTTGCTTTGGAGTTCATCATTGCCTTCAATCTCATGTTCGTTGTCACTGCAGTCGCCACCGACACCAGAGCTGTGGGAGAACTCGCGGGAATCGCGGTGGGAGCCACCGTCATGCTCAATATACTCATAGCAGGGCCAGTATCAGGGGGCTCAATGAACCCAGTAAGAACACTAGGTCCTGCCATCGCCGCAAACAACTACAAAGCCATATGGGTTTATTTGGTAGCTCCCGTTCTTGGAGCTTTAGCCGGGGCAGGTACCTACACTGCAGTGAAGCTGCCCGAAGAAGACGATGACGCCAAAGCAAAGGCTTCAATCAGCTTCAGAAGGTGA 912 0.5208 MDNNEEIPSTPATPGTPGAPLFGGFNNGRNRTNNTNKNSLLKSCRCFSVEDWTIEDGALPAVSCSLPPPPPVPLARKVGAEFIGTFILMFAATAAAIVNQKTNGSETLIGCAATTGLAVMIVILATGHISGAHLNPAVTLSFAALKHFPWKHVPMYIGAQVLASICAAFALKGVYHPFMSGGVTVPSGGYAQAFALEFIIAFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPVSGGSMNPVRTLGPAIAANNYKAIWVYLVAPVLGALAGAGTYTAVKLPEEDDDAKAKASISFRR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02742 303 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Phac5g02742 303 CDD MIP 76 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 FunFam Aquaporin NIP2-1 64 296 - -
Phac5g02742 303 SUPERFAMILY Aquaporin-like 73 290 IPR023271 -
Phac5g02742 303 MobiDBLite consensus disorder prediction 1 34 - -
Phac5g02742 303 Gene3D Glycerol uptake facilitator protein. 71 296 IPR023271 -
Phac5g02742 303 Pfam Major intrinsic protein 74 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac5g02742 303 PANTHER AQUAPORIN NIP2-1 38 289 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02742 Phac-Chr5 44235109 44239152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02742 3 303 Major Intrinsic Protein MIP AT1G80760 75.896 3.27e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02742 K09874 - gmx:100815637 476.478