Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02738 ATGACTGTCACGGGTTCTGGTTCCGGGCAGCCACAATTCATTTCGAGCACTGGCAATGGAAGCTTTAACCATGCGCCAATCCTTGAGAACTCAGATACTAATCAAATTGTTGTGCCTGATAAGAGAAGCTGGAAAAATTTATTTGCCTACATGGGGCCTGGGTTTCTTGTATCCATTGCATACATAGACCCAGGGAACTTTGAGACGGATCTTCAGGCTGGGGCACAATATAAATATGAGTTACTTTGGATCATATCGGTGGCTTCATGTGCTGCTCTTGTAATTCAATCAATGGCAGCCAATCTTGGGGTGGTCACTGGAAAACACTTAGCAGAGCATTGTAGAACTGAATATCCCCGGGTGCCCAATTTCATCCTTTGGATTATTGCTGAAATTGCTATAGTGGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCACTGAACATGCTCTTCAACATACCCGTTTGGATTGGTGTTCTTGTGACAGGACTCAGCACACTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTCGAATTCTTGATTGCATTTCTTGTATTTACAATTGCTGCATGTTTTATGGCTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTATAAAGGGTCTATTTGTGCCAGAACTAAAAGGAAATGGTGCAACTGGTCTTGCAATTTCACTCCTTGGAGCTATGGTTATGCCGCACAATCTCTTCCTGCACTCAGCACTGGTGCTGTCTAGGAAAATACCACGATCGGTTCGGGGAATCAATGAGGCTTGTAGGTTTTACATGATAGAAAGTGCCTTCGCTCTCATGGTGGCCTTCCTCATAAATGTTGCTGTTATTTCTGTAAGTGGTGCTGTTTGCAATTCTTCGAATTTGAATGCAGAAGATCGGATGAGCTGTCAGGATTTGGATCTGAACAAAGCCTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGGAATTGCTTTGCTTGCATCGGGTCAAAGTTCTACCATAACAGGAACATATGCTGGGCAGTATGTCATGCAGGGATTTCTTAATTTACGACTGGAGCCATGGATTCGGAATATGTTAACTCGTTGCTTAGCCATAGTTCCTAGCTTGATTGTTGCAGTCATTGGTGGATCTGCCGGGGCTGGGAAGCTCATAATAATTGCATCCGTAAGATATCATTTCGATCGAATTTTCTTTGATTTTGACACTTGGGAATATGCTTTGGATTGA 1260 0.431 MTVTGSGSGQPQFISSTGNGSFNHAPILENSDTNQIVVPDKRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQAGAQYKYELLWIISVASCAALVIQSMAANLGVVTGKHLAEHCRTEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLVTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFMAELGYAKPDAKEVIKGLFVPELKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGINEACRFYMIESAFALMVAFLINVAVISVSGAVCNSSNLNAEDRMSCQDLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLNLRLEPWIRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASVRYHFDRIFFDFDTWEYALD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02738 419 Hamap Divalent metal cation transporter MntH [mntH]. 32 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 NCBIfam Nramp family divalent metal transporter 52 398 - -
Phac5g02738 419 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 396 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 Pfam Natural resistance-associated macrophage protein 67 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phac5g02738 419 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 39 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02738 Phac-Chr5 44218062 44223412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02738 3 408 Inorganic Solute Cotransporters AT1G80830 82.064 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02738 K21398 - gmx:100797298 739.569