Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02733 ATGGATTATTCATCACGGATTAACACTTCCTTGGATCTCAATATTAATCCTCTCAGGCTTCATCAAGAACTTCCCAAAAAGGAGGTGGAACATAATTTTTTCTCTCTGGGGCTGAAGAAATCTTCTGTAAAAGAACAGTCTTCTGGTGCCTTGGTGGAGGAGCTGAAGCGGGTGAGTGCAGAAAACAAGAAATTGAGCGAAATGCTCACGGAGATGTGTGAGAACTACAACGCTTTGCGAAACAATCTGATGGAATATATGAGGAAGAATCCCGAGAAAGAGCTCAGCTCATCCAAGAAAAGGAAGTCTGAAAGCAGCAACAATAATAATAGCACTCCGATGGGCATCAACGGAAACTCTGAGAGCAGCTCAACCGATGAAGAATCATGCAAGAAACCAAAGGAAGAAATCAAGACAACAGTTTCAAGAGTTTACGTGAGGACGGAAGCATCTGATACAAGCCTGATTGTGAAAGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCTTACTTCAAGTGCTCTTTTGCTCCAAGTTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTTGTTGCAACTTATGAAGGAGAGCACAATCATCCCCACCCATCTCAAATGGAGGTAACAGCAGGCTCCAACCGTGGTGTGGCCCCATGTTCAGGGTCTCTTGGCTCTTCCGCACCAACAGTTACCCTTGACTGGACAAAATCCAAGTCCAGCACCGATTCCAAGAATGCAACTGCCAAAATCGATGCACCAGAAGTCCCTCAGGTTTTGGTAGAACAGATGGCCACTTCCTTGACTAAGGATCCTAACTTCAGAGCAGCACTAGTTGCCGCAATCTCAGGAAAAATGTTGCACAATAATTGA 915 0.4459 MDYSSRINTSLDLNINPLRLHQELPKKEVEHNFFSLGLKKSSVKEQSSGALVEELKRVSAENKKLSEMLTEMCENYNALRNNLMEYMRKNPEKELSSSKKRKSESSNNNNSTPMGINGNSESSSTDEESCKKPKEEIKTTVSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPSQMEVTAGSNRGVAPCSGSLGSSAPTVTLDWTKSKSSTDSKNATAKIDAPEVPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02733 304 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 300 IPR044810 GO:0003700
Phac5g02733 304 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g02733 304 Gene3D WRKY domain 139 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g02733 304 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g02733 304 MobiDBLite consensus disorder prediction 102 124 - -
Phac5g02733 304 FunFam WRKY transcription factor 40 142 219 - -
Phac5g02733 304 MobiDBLite consensus disorder prediction 91 136 - -
Phac5g02733 304 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g02733 304 Coils Coil 55 89 - -
Phac5g02733 304 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02733 Phac-Chr5 44179703 44181817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02733 4 304 WRKY Transcription Factor Family AT1G80840 54.890 2.34e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g02733 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02733 - - gmx:732588 490.345