Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02716 ATGACCACTTCACTTTCACATTCTGAAAGACGCTTCACCAACAAGTTTGAACCACCAATCACCATCATCATGGCTAGACCCCAACAACGCTATCGTGGTGTCCGCCAGAGGCACTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTTTTGAAGACAAGAATATGGCTGGGAACGTTTGAATTAGAAGAAGATGCAGCCAGAGCATACGATGAAGCAGCAAGGTTAATGTGTGGACCAAAAGCACGCACCAATTTCCCTTACAATCCTAACGACCCTCAATCGTCTTCATCGAAGCTCCTTTCTGCAGCTCTCACTGCGAAGCTACACAAGTGTCACATGGCCTCTCTTTCTCTTCAGAGGAAGCAGAAGGAATCGCAAAAAATGGCTGAAGGGTCATCCAATTCAGGCAATGCTGTTGCGGGAACGAGTGAGGACACAACAGGGTTCAGATGGGCAGAGAAGAGACACGAGGAAGTGCAGTGGCTGGAAGAAGAGCATGCTGAAGTGGGAGAAGCAGAACAACAACAGTTTCAGCCAGTTCTTGAAGATGATCACATTGAACAAATGATACAGGAGCTTCTTGATTATGGATCAATGGAGCTTAGTTGTGTTGACTCAGTCTAA 627 0.4737 MTTSLSHSERRFTNKFEPPITIIMARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFELEEDAARAYDEAARLMCGPKARTNFPYNPNDPQSSSSKLLSAALTAKLHKCHMASLSLQRKQKESQKMAEGSSNSGNAVAGTSEDTTGFRWAEKRHEEVQWLEEEHAEVGEAEQQQFQPVLEDDHIEQMIQELLDYGSMELSCVDSV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02716 208 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Phac5g02716 208 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Phac5g02716 208 MobiDBLite consensus disorder prediction 120 145 - -
Phac5g02716 208 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Phac5g02716 208 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Phac5g02716 208 MobiDBLite consensus disorder prediction 120 146 - -
Phac5g02716 208 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 28 155 - -
Phac5g02716 208 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Phac5g02716 208 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Phac5g02716 208 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Phac5g02716 208 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Phac5g02716 208 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02716 Phac-Chr5 44107738 44108560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02716 24 205 AP2-EREBP Transcription Factor Family AT5G25190 62.295 1.58e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac5g02716 AP2 1.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02716 - - gmx:100812021 295.819