Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02687 ATGACTATACTAAGAAAAGGAAGAGGAAAGAAACAACCTCCTTGGCGGGTGTTTTCTTTGAAGGAATTGCACTCAGCTACTAATAATTTCAACTATGATAACAAGCTAGGAGAAGGGGGATTTGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCGCAGATTGCGGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCTAGAGTCCGTCACAAGAATCTTCTCAGTCTACGTGGCTATTGTGCTGAAGGTCAGGAACGGTTAATTGTATATGATTATATGCCAAATTTGAGCTTGCTCTCTCATCTTCATGGACAGCACTCAGCAGAATCCCTTCTTGATTGGAACCGGCGGATGATCATCGCAATCGGGTCTGCCGAGGGAATTGCATATCTTCACCTCCAGTCAACTCCACACATCATCCACAGAGATATAAAGGCAAGCAATGTGTTGTTGGATTCAGATTTTCAGGCACGAGTTGCTGATTTTGGTTTCGCAAAGTTGATCCCTGATGGGGCAACACATGTGACTACTAGAGTTAAGGGCACCCTGGGCTACCTTGCACCTGAATATGCTATGCTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTCGGAATTCTCCTTCTAGAACTTGCTAGTGGCAAAAAGCCACTTGAAAAACTTAGTTCTACGGTAAAGAGATCAATAAATGACTGGGCACTTCCATTGGCTTGTGAGAAGAAGTTTAGTGAGCTAGCAGATCCAAAACTGGAGGGTAACTATGTGGAGGAAGAGCTTAAAAGGGTCGTTTTAATTGCTCTATTATGTGCTCAGAGTCAGGCAGAGAAGAGGCCCACCATACTTGAGGTGGTAGAACTACTGAAGGGAGAATCCAAAGATAAGTTAGTTCAGCTGGAAAATAATGAAATCTTTAAGAACCCTCCTGCAGCACATACTGATGATGAGAACTTTGCAGCTGAAGGCAGTTCAGATTTCATCTCAGAAGAGAAAGAATCAAAACCTGAGGTGGAAGAGAAAACTGGGCCATGA 1071 0.4323 MTILRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAESLLDWNRRMIIAIGSAEGIAYLHLQSTPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSTVKRSINDWALPLACEKKFSELADPKLEGNYVEEELKRVVLIALLCAQSQAEKRPTILEVVELLKGESKDKLVQLENNEIFKNPPAAHTDDENFAAEGSSDFISEEKESKPEVEEKTGP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02687 356 Coils Coil 295 315 - -
Phac5g02687 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Phac5g02687 356 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Phac5g02687 356 FunFam PTI1-like tyrosine-protein kinase At3g15890 106 317 - -
Phac5g02687 356 CDD STKc_IRAK 36 303 - -
Phac5g02687 356 Gene3D Transferase(Phosphotransferase) domain 1 106 319 - -
Phac5g02687 356 ProSiteProfiles Protein kinase domain profile. 30 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02687 356 PANTHER OS01G0253100 PROTEIN 13 307 - -
Phac5g02687 356 MobiDBLite consensus disorder prediction 319 356 - -
Phac5g02687 356 SUPERFAMILY Protein kinase-like (PK-like) 13 301 IPR011009 -
Phac5g02687 356 MobiDBLite consensus disorder prediction 338 356 - -
Phac5g02687 356 Pfam Protein kinase domain 31 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02687 356 FunFam PTI1-like tyrosine-protein kinase At3g15890 3 105 - -
Phac5g02687 356 SMART serkin_6 30 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02687 356 Gene3D Phosphorylase Kinase; domain 1 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02687 Phac-Chr5 43953850 43956739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02687 18 304 Trihelix Transcription Factor Family AT1G70460 51.203 1.27e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Phac5g02687 Pkinase 5.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02687 - - gmx:100788153 658.292