Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02686 ATGGCTTTTTGCCCAATCTTTTGCTGCGGAAATGGTTCGGATCGAAAAGGAAGAGGAAAGAAACAACCTCCTTGGCGGGTGTTTTCTTTGAAGGAATTGCACTCAGCTACTAATAATTTCAACTATGATAACAAGCTAGGAGAAGGGGGATTTGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCGCAGATTGCGGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCTAGAGTCCGTCACAAGAATCTTCTCAGTCTACGTGGCTATTGTGCTGAAGGTCAGGAACGGTTAATTGTATATGATTATATGCCAAATTTGAGCTTGCTCTCTCATCTTCATGGACAGCACTCAGCAGAATCCCTTCTTGATTGGAACCGGCGGATGATCATCGCAATCGGGTCTGCCGAGGGAATTGCATATCTTCACCTCCAGTCAACTCCACACATCATCCACAGAGATATAAAGGCAAGCAATGTGTTGTTGGATTCAGATTTTCAGGCACGAGTTGCTGATTTTGGTTTCGCAAAGTTGATCCCTGATGGGGCAACACATGTGACTACTAGAGTTAAGGGCACCCTGGGCTACCTTGCACCTGAATATGCTATGCTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTCGGAATTCTCCTTCTAGAACTTGCTAGTGGCAAAAAGCCACTTGAAAAACTTAGTTCTACGGTAAAGAGATCAATAAATGACTGGGCACTTCCATTGGCTTGTGAGAAGAAGTTTAGTGAGCTAGCAGATCCAAAACTGGAGGGTAACTATGTGGAGGAAGAGCTTAAAAGGGTCGTTTTAATTGCTCTATTATGTGCTCAGAGTCAGGCAGAGAAGAGGCCCACCATACTTGAGGTGGTAGAACTACTGAAGGGAGAATCCAAAGATAAGTTAGTTCAGCTGGAAAATAATGAAATCTTTAAGAACCCTCCTGCAGCACATACTGATGATGAGAACTTTGCAGCTGAAGGCAGTTCAGATTTCATCTCAGAAGAGAAAGAATCAAAACCTGAGGTGGAAGAGAAAACTGGGCCATGA 1101 0.436 MAFCPIFCCGNGSDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAESLLDWNRRMIIAIGSAEGIAYLHLQSTPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSTVKRSINDWALPLACEKKFSELADPKLEGNYVEEELKRVVLIALLCAQSQAEKRPTILEVVELLKGESKDKLVQLENNEIFKNPPAAHTDDENFAAEGSSDFISEEKESKPEVEEKTGP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02686 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02686 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Phac5g02686 366 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Phac5g02686 366 MobiDBLite consensus disorder prediction 348 366 - -
Phac5g02686 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Phac5g02686 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Phac5g02686 366 MobiDBLite consensus disorder prediction 329 366 - -
Phac5g02686 366 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02686 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Phac5g02686 366 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Phac5g02686 366 PANTHER OS01G0253100 PROTEIN 21 317 - -
Phac5g02686 366 CDD STKc_IRAK 46 313 - -
Phac5g02686 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Phac5g02686 366 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02686 366 Coils Coil 305 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02686 Phac-Chr5 43953286 43956739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02686 28 314 Trihelix Transcription Factor Family AT1G70460 51.203 1.09e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Phac5g02686 Pkinase 6.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02686 - - gmx:100788153 691.804