Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02678 ATGATGGACATGTTAAGATGGGGAACCTTCTTTGTGTTCCTTTTGTTTAGTACCTGTTTGGCAAAAGATCAACACATTATTCGGATATATCCTGGTTTCAGTGCTTCTCAACCTGATTGGAGCGACCATAATGGTTTTTTCTTGGTATCCAACAGCTCAGCTTTCGCTTTTGGATTCTTCACTACTCTTGATGTTTCATCGTTTGTTTTAGTTGTCTTGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGAAATCTGCTAAATTTGAGCTTGACCATAGTGGGAATGCATATTTGGAAGGTGATGATGGTGTGGTTTGGGCAACAAATACAACAGGGCAGAAAGTGAGAGCCATGGAGTTGCTAGACTCAGGGAATTTGGTGTTGCTTGGGGATAATGGGAGAGCTATTTGGCAAAGTTTTAGCCATCCCACTGATACCCTTTTGCCTGGTCAACCCTTCGTGGAGGGAATGACCCTCAAAAGCTTCCACAACACCTTGAACATGTATTTTTATCTCAGTTATAAGGAAGGTGATTTATTTCTCTACGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTGTCAGGAGAAGAGGGTGATGCTCAGAGAATCTCAAAAAATATCACTAGCAAGGTTCACTCAGCTTCTTTGGTGTCCAATTCATGGAGATTTTATGACAAAGATCAAATTTTGCTGTGGAAAATTGACTTCTCTGACACCTCAGATCCCAACTCATTGTGGGCTGCAACCTTGGATCCAACTGGGGCTATCACTTTTTATGATCTTAACAAAGGGAGGTCTCCTAATCCTGATGCAGTTAAGGTACCAAAAGACCCCTGTGGCACTCCCCTGCCTTGTGATGCTTACTATGTTTGCTTCTTTCAAAACTGGTGCATCTGCCCCAAACTTCTCAAATCTAGTTTTAACTGCAAACCTCCCAACATCTCCACCTGTTCCACTACTTCAAAAGAACTTGTTTTTGTGGGTGAAAAGCTTGATTATTTTGCTCTCAAGTACACTACACCGGTCTCAAAATCCACCCTCAGTTCTTGCAAAGAGGGTTGTTTAGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGCACCGGAAGATGCTTTCATTTTGATGAGACTGGGAGTTTCCAACGCAGTAAGGGGGGCGCTGGTGGTTATGTTTCATTCATGAAGGTCTCCATTAGTAGTGATGATGGAGTACATAGCAACAAAAATGGAAGGAATGACACTGTGCTAGTTGTAGTCATAGTGATTCTCACAGTTCTGGTTATTGTTGGTCTTGTCACAGGATTCAGGTACTACTACAAGAGGAAGAAGAATGTTGCAAGGTACCCTCAAGACACCTTTGAGGAAGATGATGATTTCTTGGAGAGTATCTCTGGGATGCCTGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACCAAGGACTTTTCCACAAAGATTGGAGAAGGAGGTTTTGGCTCAGTGTATTTAGGTGAGCTTGAAGATGGCACCCAGTTGGCTGTGAAAAAGTTGGAAGGTGTTGGACAAGGAGCAAAAGAGTTCAAAGCAGAAGTGTCCATAATAGGAAGTATTCACCATGTTCATCTGGTGAAGCTCAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACAGCTTCTTGCTGAACTGGGAGACAAGGCACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTGCACGAGGAGTGTGAAGTGAGGATCATCCACTGTGACATCAAGCCACAGAATGTTCTTCTTGATGATAACTTCACAGCAAAGGTTTCAGATTTTGGATTGGCCAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTATGAGAGGCACAAGAGGGTATCTGGCACCAGAATGGATTACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGAATGCTCTTGCTTGAGATAATTGGAGGGAGGAAGAACTATGATCAATGGGAAGGGGCAGAGAAGGCACATTTTCCTTCTTATGTGTTCAGAATGATGGATGAAGGGAAACTGAGAGAAGTTGTTGATCCAAAGATAGATGTTGATGAGAAGGATGAAAGGGTTGAAGCTGCTATAAAAGTTGGTCTTTGGTGCATACAAGATGATGTGAGTTTGAGGCCTTCAATGACAAAGGTAGCTCAGATGCTTGAAGGGTTGTGCCATGTACCTGATCCACCATCATTATCTCAAGCTGGAACTTATTCAGCTTTCATGAAATTGAGCAGTGGAGAAGCTACTTCATCACAGGCTAGTTTTTTTAGCAATGTACCAATGTCATGTGTTCAATTATCAGGACCAAGATGA 2436 0.4306 MMDMLRWGTFFVFLLFSTCLAKDQHIIRIYPGFSASQPDWSDHNGFFLVSNSSAFAFGFFTTLDVSSFVLVVLHLSSYKVVWTANRGLLVGKSAKFELDHSGNAYLEGDDGVVWATNTTGQKVRAMELLDSGNLVLLGDNGRAIWQSFSHPTDTLLPGQPFVEGMTLKSFHNTLNMYFYLSYKEGDLFLYAGFETPQVYWSLSGEEGDAQRISKNITSKVHSASLVSNSWRFYDKDQILLWKIDFSDTSDPNSLWAATLDPTGAITFYDLNKGRSPNPDAVKVPKDPCGTPLPCDAYYVCFFQNWCICPKLLKSSFNCKPPNISTCSTTSKELVFVGEKLDYFALKYTTPVSKSTLSSCKEGCLGNCSCLVLFFENSTGRCFHFDETGSFQRSKGGAGGYVSFMKVSISSDDGVHSNKNGRNDTVLVVVIVILTVLVIVGLVTGFRYYYKRKKNVARYPQDTFEEDDDFLESISGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGELEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENSFLLNWETRHNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLREVVDPKIDVDEKDERVEAAIKVGLWCIQDDVSLRPSMTKVAQMLEGLCHVPDPPSLSQAGTYSAFMKLSSGEATSSQASFFSNVPMSCVQLSGPR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02678 811 FunFam serine/threonine-protein kinase PBS1-like 459 564 - -
Phac5g02678 811 CDD B_lectin 44 151 IPR001480 -
Phac5g02678 811 FunFam S-receptor-like kinase 5 565 769 - -
Phac5g02678 811 ProSiteProfiles PAN/Apple domain profile. 326 407 IPR003609 -
Phac5g02678 811 CDD STKc_IRAK 496 763 - -
Phac5g02678 811 SMART blect_4 39 151 IPR001480 -
Phac5g02678 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Phac5g02678 811 Pfam D-mannose binding lectin 80 160 IPR001480 -
Phac5g02678 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 771 - -
Phac5g02678 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 202 IPR036426 -
Phac5g02678 811 ProSiteProfiles Bulb-type lectin domain profile. 33 149 IPR001480 -
Phac5g02678 811 Pfam Protein kinase domain 493 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02678 811 Gene3D Phosphorylase Kinase; domain 1 456 564 - -
Phac5g02678 811 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Phac5g02678 811 PIRSF SRK 1 808 IPR024171 GO:0004674
Phac5g02678 811 Gene3D Transferase(Phosphotransferase) domain 1 565 765 - -
Phac5g02678 811 ProSiteProfiles Protein kinase domain profile. 490 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02678 811 SUPERFAMILY Protein kinase-like (PK-like) 473 762 IPR011009 -
Phac5g02678 811 Gene3D - 38 152 IPR036426 -
Phac5g02678 811 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02678 Phac-Chr5 43918545 43921610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02678 433 770 Receptor kinase-like Gene Family AT5G20050 44.538 3.71e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac5g02678 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02678 - - gmx:100786024 1405.96