Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02670 ATGGCATCAAATATCATATTTACAGTGAAAGATGATAATCCTATTGGGGCAACATTGATTGGAAGAGCATATGTGCCTGTTGGGGAGATTTTGCATGGTGAAGAAATAGATAGATGGGTTGAAATATTGGATGAGGATAAAAATCCAATACATGGAAATTCCAAGATCCACGTGAAGCTGCAATATTTTGATATTTCGAAAGACCGCAACTGGGCTCTTGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATACTTTCTTTTCACAAAGAAGAGGATGTAAGGTTTCTCTGTACCAAGATGCTCATGTACCAGACAACTTTGTCCCTAAAATACCACTTAGTGGGGGCCAGACATACCAACCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACTAAAGCACAGCACTTAATATACATTACCGGTTGGTCTGTATATACTGAGATATCGTTGGTAAGGGATTCTAGGAGGCCAAAGCCTGGAGGAGACGAAACACTTGGTGAGCTGCTGAAGAAAAAGGCAAGTGAAGGTGTCAGGGTATTAATGCTAGTCTGGGATGATAGAACTTCTGTTCCTTTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACAGAGCAGTACTTCAGGGACACTGAAGTGCATTGTGTTTTATGCCCTCGCAATCCTGATGACGGTGGAAGCATTGTTCAGGATTTGGAAATTTCTACCATGTTTACTCATCACCAGAAAATCGTAGTCGTGGACAGTGATTTGCCGAGTGGAGAATCTGAGAAGCGAAGGATTGTTAGTTTTGTGGGGGGAATTGATCTCTGTGATGGAAGATATGACAGTCCATTCCACTCTCTTTTCAGAACCCTGGACACAGCGCATCATGATGATTTTCATCAGCCTAACTTTGGTGGTGCATCAATACAAAAAGGTGGTCCCAGGGAACCATGGCATGACATCCACTCTCGACTTGAAGGGCCTATTGCTTGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAGGAAGCAGGGAGGAAAGGACTTACTTGTTCCACTGAGAGACCTTGAAGATGTCATTATTCCTCCATCCCCAGTAACGTACCCTGATGACCAAGAGACATGGAACGTTCAGTTATTCAGATCAATTGATGGTGGAGCTGCTTTTGGGTTCCCGGAGACTCCTGAAGAAGCTGCTAGAGTTGGGCTTGTTAGTGGGAAGGATAATATAATAGATCGTAGTATACAAGATGCTTATATTAATGCCATTAGGCGTGCAAAAAATTTCATCTATATTGAGAATCAGTATTTCCTTGGAAGCTGTTATGATTGGAGTCCTGATGGCATCAAGCCTGAAGACATTGGTGCTTTACATCTTATCCCGAAGGAGCTTTCACTTAAGATTGTTAGTAAGATTGAAGCTGGGGAAAGGTTCAGTGTGTATGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTGGATTGGCAGAGGAGAACAATGGACATGATGTACAAGGATGTTGTTCAGGCGCTCCGGGCCAAGGGAATTGAGGAAAATCCTCGGAACTATTTGACATTCTTCTGCCTTGGTAATCGGGAGGTGAAGAAAGAAGGAGAGTACGAGCCTTCAGAAAGACCAGACCCTGATACAGATTATATAAGAGCCCAAGAGGCCCGGCGCTTCATGATATATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATTGTTGGATCAGCCAACATAAACCAGAGATCAATGGATGGTGCAAGAGACTCTGAGATTGCAATGGGTGCTTATCAACCCTATCATTTGATCACGAGTCAGCCAGCAAGGGGTCAGATCCATGGCTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTCTACCCTGAAAGTACAGAATGTATAGGGAAGGTGAACCAGATTGCTAACAAGTATTGGGATCTGTATTCAAGTGAGTCTCTTGAGCATGACCTTCCTGGCCACTTACTCCGCTATCCAATTGGGGTTTCCAGCGAAGGAATTGTCACTGAGCTACCAGGTTTTGAATTCTTTCCTGACACCAAGGCCCGTGTTCTTGGCGACAAAGTTGACTACCTGCCACCCATCCTTACTACTTAG 2172 0.4355 MASNIIFTVKDDNPIGATLIGRAYVPVGEILHGEEIDRWVEILDEDKNPIHGNSKIHVKLQYFDISKDRNWALGIRSPKFPGVPYTFFSQRRGCKVSLYQDAHVPDNFVPKIPLSGGQTYQPHRCWEDVFDAITKAQHLIYITGWSVYTEISLVRDSRRPKPGGDETLGELLKKKASEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEQYFRDTEVHCVLCPRNPDDGGSIVQDLEISTMFTHHQKIVVVDSDLPSGESEKRRIVSFVGGIDLCDGRYDSPFHSLFRTLDTAHHDDFHQPNFGGASIQKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRDLEDVIIPPSPVTYPDDQETWNVQLFRSIDGGAAFGFPETPEEAARVGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYDWSPDGIKPEDIGALHLIPKELSLKIVSKIEAGERFSVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDVVQALRAKGIEENPRNYLTFFCLGNREVKKEGEYEPSERPDPDTDYIRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLITSQPARGQIHGFRMSLWYEHLGMLHDSFLYPESTECIGKVNQIANKYWDLYSSESLEHDLPGHLLRYPIGVSSEGIVTELPGFEFFPDTKARVLGDKVDYLPPILTT* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02670 723 PANTHER PHOSPHOLIPASE D 3 712 IPR015679 -
Phac5g02670 723 FunFam Phospholipase D delta 116 359 - -
Phac5g02670 723 Pfam Phospholipase D C terminal 642 712 IPR024632 -
Phac5g02670 723 Pfam Phospholipase D Active site motif 570 596 IPR001736 GO:0003824
Phac5g02670 723 Pfam Phospholipase D Active site motif 241 279 IPR001736 GO:0003824
Phac5g02670 723 Gene3D Endonuclease Chain A 115 354 - -
Phac5g02670 723 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 63 IPR035892 -
Phac5g02670 723 Gene3D Endonuclease Chain A 387 614 - -
Phac5g02670 723 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 241 279 IPR001736 GO:0003824
Phac5g02670 723 SUPERFAMILY Phospholipase D/nuclease 67 360 - -
Phac5g02670 723 SMART pld_4 569 596 IPR001736 GO:0003824
Phac5g02670 723 SMART pld_4 241 279 IPR001736 GO:0003824
Phac5g02670 723 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 569 596 IPR001736 GO:0003824
Phac5g02670 723 CDD PLDc_pPLDalpha_2 407 615 - -
Phac5g02670 723 PIRSF PLD_plant 1 723 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phac5g02670 723 Gene3D C2 domain 1 72 IPR035892 -
Phac5g02670 723 FunFam Phospholipase D 382 615 - -
Phac5g02670 723 SUPERFAMILY Phospholipase D/nuclease 362 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02670 Phac-Chr5 43887523 43892837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02670 1 723 Phospholipase D Gene Family (Wang group) AT3G15730 82.320 0.0 1282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02670 K01115 - gmx:100784434 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02670 5 43887523 43892837 Phac5g02670 5 43887523 43892837 ECH