Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02668 ATGGCACAAGTTGTGCTTCATGGAACCCTCCATGCCACAATCTATGAGGTGGATAACCTCAAGGCTGGTAATGGTGGTAATATTTTAAGCAAGCTGCTACATAACATGGAGGAGACCATTGGGATTGGGAAGGGAATCACTAAACTATATGCAACCATTGATCTCGAGAAGGCACGCGTGGGAAGGACTAGAGTTATAGAAAAAGAGCACACAAATCCTAAATGGTGCGAATCTTTTCACATCTACTGTGCTCATGAGGCATCAAACATCATATTCACAGTGAAAGATGACAACCCTATTGGTGCAACCTTAATTGGAAGAGCATATGTGCCTGTTGAAGAGATTTTGCATGGTGAAGAAATAGATAGATGGGTTGAAATATTGGATGAGCATAAAAAACCAATACACTCACATTCCAAGATCCATGTGAAGCTGCAGTACTATGATGTTTCAAAAGACCTTAACTGGGGCCAAGGCATAAAAAGTCCTAAATTCCCTGGAGTTCCTTACACTTACTTTTCACAAAGACAAGGGTGTAGAGTTTCCTTGTACCAAGATGCTCATGTTCCAGACAACTTTGTTCCCAGAATACAACTTTCTGGAGGACACACTTACCAACCTCGTAGATGTTGGGAAGATGTTTTTGATGCAATCAACCACGCACAGCACTTGATCTACATTACAGGGTGGTCTGTTTACACAGAGATTACATTGGTGAGAGATTCTAGGAGGCCAAAGCCTGGAGGAGATGCAACACTTGGTGAGCTTCTAAAGAGAAAAGCACGTGATGGTGTCAGGGTTTTGATGCTTGTTTGGGATGACAGAACTTCTGTTCCTCTGTTGAAAGAAAACGGGTTCATGGCTACTCATGATGAAGATACTGGGAACTACTTCTACGACAGTGAAGTGCACTGTGTTCTGTGCCCTCGCAACCCTGATAACGGTGGCAGCGTTATTCAGGACATGGAAATTTTGTCCATGTTCACCCATCATCAGAAGATTGTGGTTGTGGACAGTGCTCTGCCTAATGGAAGATCAGATAAGCGAAGAATCGTGAGCTTCGTGGGGGGTATTGACCTCTGCGATGGAAGATACGACACTCAGTTTCACTCTCTTTTCAGAACCTTGAACACTGCTCATCATGGTGATTTTCATCAGCCTAATTTTCCACATGCTACGATCAAAAAAGGTGGTCCAAGAGAACCCTGGCATGACATTCATTCTCAGCTTGAAGGCCCAATTGCATGGGATGTTCTGTTCAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGCAAGGACTTGCTAGTTCCTCTGAGAGACCTTGAAGATGTGATTATTCCTCCTTCCCCTGTAACTTACCCTGATGATCATGAGACATGGAACGTGCAGTTGTTTAGATCCATTGATGCTGGAGCAGCTTCTGGGTTCCCAGACACTTCCGAAGAAGCTGCTAGATCTGGACTCATCAGTGGAAAATTGTGTATAAGTGACAGAGGCATTCAAGATGCTTATATCAACGCCATTCGACGTGCAAAGAATTTCATCTACATTGAGAATCAGTATTTCCTTGGAAGCTGTTATGCTTGGAGTGATGATGGGATTAAGCCTGAAGACATTGGTGCATTGCATCTGATCCCGAGGGAGCTTTCTCTTAAGATTGTTAGCAAGATTGAAGCAGGAGAAAGGTTCAGTGTGTATGTTGTGGTTCCAATGTGGCCGGAGGGTTACCCGGAGAAAGGAACAGTTCAGGCAATACTGGACTGGCAGCGAAGAACAATGGATATGATGTATAAGGATGTTGTCGGAGCGTTGAAGGCGAAGGGAGTTGAAGAAGATCCTCGGAACTATTTGACATTCAGAAAGACCAGATCCTGA 1875 0.4405 MAQVVLHGTLHATIYEVDNLKAGNGGNILSKLLHNMEETIGIGKGITKLYATIDLEKARVGRTRVIEKEHTNPKWCESFHIYCAHEASNIIFTVKDDNPIGATLIGRAYVPVEEILHGEEIDRWVEILDEHKKPIHSHSKIHVKLQYYDVSKDLNWGQGIKSPKFPGVPYTYFSQRQGCRVSLYQDAHVPDNFVPRIQLSGGHTYQPRRCWEDVFDAINHAQHLIYITGWSVYTEITLVRDSRRPKPGGDATLGELLKRKARDGVRVLMLVWDDRTSVPLLKENGFMATHDEDTGNYFYDSEVHCVLCPRNPDNGGSVIQDMEILSMFTHHQKIVVVDSALPNGRSDKRRIVSFVGGIDLCDGRYDTQFHSLFRTLNTAHHGDFHQPNFPHATIKKGGPREPWHDIHSQLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRDLEDVIIPPSPVTYPDDHETWNVQLFRSIDAGAASGFPDTSEEAARSGLISGKLCISDRGIQDAYINAIRRAKNFIYIENQYFLGSCYAWSDDGIKPEDIGALHLIPRELSLKIVSKIEAGERFSVYVVVPMWPEGYPEKGTVQAILDWQRRTMDMMYKDVVGALKAKGVEEDPRNYLTFRKTRS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02668 624 Gene3D C2 domain 5 156 IPR035892 -
Phac5g02668 624 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824
Phac5g02668 624 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Phac5g02668 624 SUPERFAMILY Phospholipase D/nuclease 492 597 - -
Phac5g02668 624 FunFam Phospholipase D delta 201 444 - -
Phac5g02668 624 SMART pld_4 326 364 IPR001736 GO:0003824
Phac5g02668 624 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Phac5g02668 624 Gene3D Endonuclease Chain A 198 439 - -
Phac5g02668 624 Gene3D Endonuclease Chain A 488 624 - -
Phac5g02668 624 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Phac5g02668 624 SMART C2_3c 9 124 IPR000008 -
Phac5g02668 624 PANTHER PHOSPHOLIPASE D 4 619 IPR015679 -
Phac5g02668 624 SUPERFAMILY Phospholipase D/nuclease 152 445 - -
Phac5g02668 624 Pfam C2 domain 8 127 IPR000008 -
Phac5g02668 624 CDD C2_plant_PLD 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02668 Phac-Chr5 43879054 43882924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02668 1 619 Phospholipase D Gene Family (Wang group) AT3G15730 74.879 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02668 K01115 - gmx:100784434 1092.8