Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02609 ATGGAGAAAGAAGATCTTGGTCTTGAGATCACTGAGCTCAGGTTGGGGCTTCCCGGCGGGGAGAAGACGGAGAAGGAGACGAAGAAGAAGAGGGTGTTCTCCGACATTGAAGGTGAAAACAGCTCCTCTGAAGAAGATCGTAAAAAAGAAACCAAGAATCAAGTGGTGGGGTGGCCTCCGGTGTGCTCCTACCGCAAGAAGAACAGCGTCAATGAACCTAAAATGTACGTCAAAGTCAGCATGGACGGTGCTCCTTTCTTGCGTAAAATCGATCTAGCTATGCACAAGGGATACTCCGACTTCGCCTTTGCCTTGGACAACTTCTTCGGTTGCTATGGAATCGGCGAAGCGTTGAAGGATGCGGAGAATGCTGAACACGTTCCCATATACGAGGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTTCCTTGGGAGATGTTTAGGGAGTCATGCAAGAGATTGAGGATTATGAAGAGATCAGATGCAAAGGGGTTCGATCTGCAACCAAAAGGGTCTTTAAAGGGATTCATAGAAGGCGTGAAAAAATGA 552 0.4783 MEKEDLGLEITELRLGLPGGEKTEKETKKKRVFSDIEGENSSSEEDRKKETKNQVVGWPPVCSYRKKNSVNEPKMYVKVSMDGAPFLRKIDLAMHKGYSDFAFALDNFFGCYGIGEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVKK* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02609 183 Gene3D - 68 171 - -
Phac5g02609 183 FunFam Auxin-responsive protein 68 170 - -
Phac5g02609 183 Pfam AUX/IAA family 40 166 IPR033389 -
Phac5g02609 183 MobiDBLite consensus disorder prediction 17 52 - -
Phac5g02609 183 SUPERFAMILY CAD & PB1 domains 68 159 - -
Phac5g02609 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 163 IPR003311 GO:0005634|GO:0006355
Phac5g02609 183 MobiDBLite consensus disorder prediction 18 52 - -
Phac5g02609 183 ProSiteProfiles PB1 domain profile. 74 162 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02609 Phac-Chr5 43551538 43555217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02609 34 182 B3 DNA Binding Superfamily AT4G23980 29.530 1.57e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac5g02609 AUX_IAA 1.3e-42 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02609 K14484 - gmx:100811879 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02609 5 43551538 43555217 Phac5g02609 5 43551538 43555217 ECH