Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02582 ATGGATGGCATTGAGGATGATGCGAGCTATCACCCTAACCCATATCGCATCATCAGTCACCAACGAGGTTATGGTTATGGTTATGGTTATGGTCATCAGAATTCTGCATATTCCCTCCCGGTTAATACTGAGTATGTTCATCATCATGATGAAGATGAAGAACAAGAGCAGTTAGAAGGAGATGATGAGGTTGATCAAAGTAACAGCCTGCAGCTTGGCCAAAAGGATGGGGATGAAGAAAATGGCATGGATGGGGGTGTTGATGAAAATGGTGATGAGGAAGAGGAGGTAGAGGATAATAAACAGATTAGTTATTATGCCACTAAGACTGAAGATGATTTGGAGTGGCACCCAAAGAAGCAAAAGCTGAAGAGTTTGATTTCAACCTATGAACTTGCTCCTCGTTTGCCAGCGCCATCAGCTGCAGCAGCTCCAGTTCCTTCAGCTCCCAAACCATCTTCTGGGGGTAGGAATTCACTCACTGACTGGACTGAGCGTGAGACATTTGTTCTTCTTGATGCATGGGGTTACAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATGTGAGGAGTGGCAGCAAGTATCGAAAATGGTAGCACAAGTTTCAAAAATTGAAAGGACGGATACTCAGTGTAGAAACCGCCTTGACACACTGAAGAAAAAATACAAGAAGGAGAAGGCTAAATTTCCAGATAGTGATGGTGGAGATTGCAAATGGGTTTATTTTAAAAAGATGGATGAGCTAATGAATTCTCCTCCACAACAAGTTGGTATCTCTTGTGGTTTGGATTCAGGAGAGTATGTTTTTACGAACCCCGGAGTTTATTTGAATCATGCTAATGGATTGGATGAAATAAGGGATAGTCCTGAGAATGTGGAATCCACCGGTGAAGAAGGTTCGGATGGACTTCAAGCAAAGAAAAGGAAAGGAAGGAGCAGTGGTGAGGCTTCTTCCTTCAGGTTACTTGCCGATTCCATTCAAAAATTCAGTAAGATATATGAAAAGATAGAAAATAGTAAAAGGCAGCAGATGATGGAACTGGAAAAGATGAGAATGGATTTCCATAAGGATTTGGAAACACAGAAGAGACAGATGTTTGGGAATTTGCAGTTTGAGATTTCAAAACTAGAGCAGATAAATGATGAGAACGATGATTCTGCTGAGAATGGTATGTGA 1179 0.4173 MDGIEDDASYHPNPYRIISHQRGYGYGYGYGHQNSAYSLPVNTEYVHHHDEDEEQEQLEGDDEVDQSNSLQLGQKDGDEENGMDGGVDENGDEEEEVEDNKQISYYATKTEDDLEWHPKKQKLKSLISTYELAPRLPAPSAAAAPVPSAPKPSSGGRNSLTDWTERETFVLLDAWGYRFLQHGRKSLRCEEWQQVSKMVAQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDSDGGDCKWVYFKKMDELMNSPPQQVGISCGLDSGEYVFTNPGVYLNHANGLDEIRDSPENVESTGEEGSDGLQAKKRKGRSSGEASSFRLLADSIQKFSKIYEKIENSKRQQMMELEKMRMDFHKDLETQKRQMFGNLQFEISKLEQINDENDDSAENGM* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02582 392 MobiDBLite consensus disorder prediction 286 318 - -
Phac5g02582 392 Gene3D - 163 225 - -
Phac5g02582 392 MobiDBLite consensus disorder prediction 301 315 - -
Phac5g02582 392 Pfam Myb/SANT-like DNA-binding domain 162 249 IPR044822 -
Phac5g02582 392 MobiDBLite consensus disorder prediction 140 160 - -
Phac5g02582 392 Coils Coil 334 354 - -
Phac5g02582 392 MobiDBLite consensus disorder prediction 82 99 - -
Phac5g02582 392 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 148 379 IPR044823 -
Phac5g02582 392 MobiDBLite consensus disorder prediction 48 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02582 Phac-Chr5 43420806 43422635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02582 308 379 Trihelix Transcription Factor Family AT3G14180 44.444 4.00e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac5g02582 Myb_DNA-bind_4 3.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02582 - - gmx:100814194 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02582 5 43420806 43422635 Phac5g02582 5 43420806 43422635 ECH