LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g02569	ATGAGAAGAAGCGTGTTTTCCTCTCTATTGCTCCTCCTTCTACTTCACCCCTCTGAAGGTGAGCACATTGCCATTTACTGGGGTCAAAACACAAATGAGGGAAGCATTGCAGAAACGTGTGCAACAGGAAAATACTCCTACGTCAACATAGCCTTCCTTTCCACCTTTGGGAATGGCCAAACCCCAAAACTGAACCTGGCTGGTCATTGTGACCCATCTTCTAATGGGTGTACTGAGATGGGAAGAGAAATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCAATTGGAGGAGGAGCTGCTGATTACTCTATAACTTCCATTGAGGATGCCAAGAATGTTTCCGACTACTTGTGGAACAATTTTCTGGGTGGATCATCCTCATCACGCCCATTTGGGGATGTAGTCTTAGATGGCATTGACTTTGACATAGTGGCAGGTGAATCATCGTTTCTGGGAAACCTTTCCCATCAACTCGTTTCATATTCACAGACACGCAAAGTCTACCTGTCAGCAGCTCCTCAGTGTCCATTTCCTGATGCTATGCTTGATTCCGCCCTTGCTACTGCCCTTTTTGACTATGTCTGGATACAATTCTACAACAATCCTTCATGCGATTATACCCAAAACAATTTCGACAACTTCCTTAAAGTATGGAACCGTTGGTCCACGTCATTGAGTGCAGGGAAAATATTTCTGGGGCTAGCAGCAGATCAAGATGCAGCTATAAGCGGTTATGTTTCAGCTGATGTATTAGTTTCGAAGATCTTGCCTGCAGTAAAGGAGTCACCAAATTATGGAGGTGTCATGTTGTGGTCAAGGTACGAGGATAAAATGAGTGGATACAGCTCCTACATTCAAAATTTTCACAGAAATCTGACTCTACGCTCTGTGTGCACACCTCAAAGCCTTCCTTCCTGCAGGAGCTCTGAAGGTCATTTCGTGGAAAGTGTTGGTAACATGTCAACCGTTGGCATTCAAGTTTATGCAGGCAGCAATGGTACGCAGTGTTGTGAGGTCATATGCAGGAACAATTGTTCCTGTCAAGCATATGCCCCAATAAACCACAAAAACAATACTGGGTGTCAGATATGGCTCAAAGGAACACAATTTGTTAGAGCCTCTGTAGACATAGCACTGCCCATCTATGTTTCTGTTGCACTGCTCCCGGAAGACAAAAGTACATCCAGATTCCCTACCACAAAAGTAAACCGGTGGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATGCCTGTAATTTTCTATTTATGGCGTGTCTTGTGGAAAAATTACAAAGCTAAAGTGGAGAGAAAGAAGATGCAGAAGAAGTTATTACATGACATTGGAGGTAATTCCAGAAAAAGTAAGAACAAGGGAAAGACAAGCAATGGGGTTGAAATATTCACCTTTGAAACCATTGTTGCTGCTACAGAGAATTTCTCAACAGCTAATAAGCTAGGAGAGGGTGGATTCGGTCCTGTTTATAAGGGAACACTAAGTGATCAGCAAGAAGTTGCAATCAAGCGACTTTCTAAGAGTTCAAGACAGGGGGTAATGGAATTTAAGAATGAAGCCAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAACTTCTAGGATTCTGCATCCAGAGAGATGAAAGAATATTGGTTTATGAATACATGCCTAACAAAAGCTTAGATTTCTACCTATTTGATTCAGCTAGAAAGAACTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTACACAAGTACTCGAGACTAAAGGTGATACATCGAGACCTGAAAGCAGGTAATATATTGCTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGCCTGGCTCGAATATTTGGTGTAAGGGCATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTACTAGAAATACTTAGTGGCAAGAAAAATAATAGTCGTTCTGATTCAGATCGTCCGCTCAACCTCATAGGATATGTGTGGCAGCTCTGGAATGAAGGCAGAACTCTGGAGTTGATAGACCCAGATTCGTATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCAACAGATAGACCAACCATGGCAGACATTGTTTCATTTCTATCAAATGATACAGTGGAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTGGAAGACTCAGAGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAACGACTTAACACTTTCTAGCACACATGGAAGATAA	2412	0.4229	MRRSVFSSLLLLLLLHPSEGEHIAIYWGQNTNEGSIAETCATGKYSYVNIAFLSTFGNGQTPKLNLAGHCDPSSNGCTEMGREIRNCQKQGIKVMLSIGGGAADYSITSIEDAKNVSDYLWNNFLGGSSSSRPFGDVVLDGIDFDIVAGESSFLGNLSHQLVSYSQTRKVYLSAAPQCPFPDAMLDSALATALFDYVWIQFYNNPSCDYTQNNFDNFLKVWNRWSTSLSAGKIFLGLAADQDAAISGYVSADVLVSKILPAVKESPNYGGVMLWSRYEDKMSGYSSYIQNFHRNLTLRSVCTPQSLPSCRSSEGHFVESVGNMSTVGIQVYAGSNGTQCCEVICRNNCSCQAYAPINHKNNTGCQIWLKGTQFVRASVDIALPIYVSVALLPEDKSTSRFPTTKVNRWYIWLIVGVAAAFAMPVIFYLWRVLWKNYKAKVERKKMQKKLLHDIGGNSRKSKNKGKTSNGVEIFTFETIVAATENFSTANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSRQGVMEFKNEAKLMAKLQHTHLVKLLGFCIQRDERILVYEYMPNKSLDFYLFDSARKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGLARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSRSDSDRPLNLIGYVWQLWNEGRTLELIDPDSYELCPQNAVLRCIHIGLLCVQDQATDRPTMADIVSFLSNDTVELPQPKQPAFFINVVVEDSELPYSRQELHSSNDLTLSSTHGR*	804

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g02569	803	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	364	794	-	-
	Phac5g02569	803	Gene3D	Glycosidases	22	292	-	-
	Phac5g02569	803	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	606	618	IPR008271	GO:0004672\|GO:0006468
	Phac5g02569	803	CDD	GH18_hevamine_XipI_class_III	23	290	IPR045321	-
	Phac5g02569	803	ProSiteProfiles	Protein kinase domain profile.	485	771	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02569	803	SUPERFAMILY	Protein kinase-like (PK-like)	468	787	IPR011009	-
	Phac5g02569	803	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	21	298	IPR001223	GO:0005975
	Phac5g02569	803	Pfam	Glycosyl hydrolases family 18	23	279	IPR001223	GO:0005975
	Phac5g02569	803	Gene3D	Phosphorylase Kinase; domain 1	458	560	-	-
	Phac5g02569	803	Pfam	Domain of unknown function (DUF3403)	758	803	IPR021820	GO:0004674
	Phac5g02569	803	CDD	STKc_IRAK	491	756	-	-
	Phac5g02569	803	Pfam	PAN-like domain	334	369	IPR003609	-
	Phac5g02569	803	Pfam	Protein tyrosine and serine/threonine kinase	487	756	IPR001245	GO:0004672\|GO:0006468
	Phac5g02569	803	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	561	764	-	-
	Phac5g02569	803	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	451	560	-	-
	Phac5g02569	803	Gene3D	Transferase(Phosphotransferase) domain 1	561	767	-	-
	Phac5g02569	803	SUPERFAMILY	(Trans)glycosidases	18	289	IPR017853	-
	Phac5g02569	803	FunFam	Acidic endochitinase SE2	21	292	-	-
	Phac5g02569	803	SMART	serkin_6	485	756	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g02569	Phac-Chr5	43335726	43339049	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g02569	475	771	Receptor kinase-like Gene Family	AT4G23230	60.606	1.15e-124	386

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g02569		PK_Tyr_Ser-Thr	2e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g02569	-		-	gmx:100794508	1181.39