Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02551 ATGTCTAGAGCATTGGAACAGGACTACATAGGGTTGGCAGAGAAACCGTCAATGGACGGAGCCTCTGACAAACTATCTTCTTCTTCTTCTTCTTCATCATCATCATCTTCTGTGGATGCTAAAACCTCACCACTGAACTTGAAGGAGACAGAGCTGAGGCTTGGTCTCCCTGGTTGCAAGTCTCCAGAGAGAAAATCTGGTGCTGGACTCTGTCTTTTTGGCAAAGAGTTGCAGAACAAGCATAATGTTTGTTCAGTTGCAAGCCCTTTGAAGGCTGGGGCTAAGAGGGGCTTCTCTGACGCTATTGACACTTCTTCTGGGAAAAGGGGTTCTTCTGTCACTGATGGATCTCAAGGAGCTGCTTTGTTCTCTCCCAGAGGGGGCATTGTTGGGAAGCTTCTTATTGGTTTAGACGCTCAAACTAATAACACCTCCATCAAAGAGGTTGGTGCAGTTCCTCAATCTGACAAACCGGTTCAGGAAAAGAATGACCAGGTTGCTGCAACAAATGGTCATGCCACTGCTCCTGATGCCAAGGCACAAGTTGTGGGGTGGCCCCCAATTCGATCTTTCCGAAAGAACACGATGGCATCTAATTTGGCAAAAAACAATGATGAAGGCGAGGGAAAACCTGGTTTTGGTTGTCTTTATGTAAAAGTCAGTATGGATGGTGCTCCTTATCTTAGAAAGATTGATCTCAAAACCTATAACAACTACATGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTTACCATAGGTCAATGCAATTCTCCTGGACTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTTCATGGATCTGAATATGTTCTTACATATGAAGATAAAGATGGAGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCACTGATTCATGTCGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAGAAATCTAGGAGCCAAAACTAA 1008 0.4514 MSRALEQDYIGLAEKPSMDGASDKLSSSSSSSSSSSSVDAKTSPLNLKETELRLGLPGCKSPERKSGAGLCLFGKELQNKHNVCSVASPLKAGAKRGFSDAIDTSSGKRGSSVTDGSQGAALFSPRGGIVGKLLIGLDAQTNNTSIKEVGAVPQSDKPVQEKNDQVAATNGHATAPDAKAQVVGWPPIRSFRKNTMASNLAKNNDEGEGKPGFGCLYVKVSMDGAPYLRKIDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02551 335 ProSiteProfiles PB1 domain profile. 215 317 IPR000270 GO:0005515
Phac5g02551 335 FunFam Auxin-responsive protein 210 327 - -
Phac5g02551 335 MobiDBLite consensus disorder prediction 21 44 - -
Phac5g02551 335 Pfam AUX/IAA family 49 326 IPR033389 -
Phac5g02551 335 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 45 322 IPR003311 GO:0005634|GO:0006355
Phac5g02551 335 SUPERFAMILY CAD & PB1 domains 215 316 - -
Phac5g02551 335 MobiDBLite consensus disorder prediction 1 46 - -
Phac5g02551 335 Gene3D - 212 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02551 Phac-Chr5 43277057 43280271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02551 217 329 B3 DNA Binding Superfamily AT1G19850 33.043 2.91e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac5g02551 AUX_IAA 5.3e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02551 K14484 - gmx:100804423 553.518