Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02550 ATGATGACTGGGTTTCCTAACTGGTGGAGCATGCATCCACCACCCCAATATGTGCTTCCACCTTCTTCAATTTCTTTTAATTTTTTGTCTGAAAATCCAGAGCCTCCTCACTCATGGACCCAACTACTTTCTGGATTACCAGGAGAAGAAGAGAATCTTTGCTTCATTGATTTTCAGCCGAAAAAGTTGGGAAACTGGGATGTTCAAATTCTTAACACTGCTTCCGGAGTTTCTAATAATTTTGATGCATTAAAGCAAGAAAATTGTGAAAGGGGCAATTTGTACGAACATGGGCGTGAAGAATTTCAGGCTTCTGATCCCGCTGATTCATCTTGGTCACATATGGTGCCTGTTTCTTCTCCCGGGTCTTCTTGTGTCTCTAGCATCAGTGGTAACAATATATTGGATTTCACCTATAACAACTCAGAACATAGAAAAAATCTCTTACAAAACCAAACATCCGAGTGCAATAGCACAGGCAGAGTTGGAGTTTGCAAGAAAGCTAGGGTTCAGTCATGTTCAAGTCAAGCACCTCTGAAGGTGCGGAAGGAGAAGCTAAGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGTGATGTTTCTGGCAATTTTTTTTCCACTGATGTTATTTATACGTTTGTAA 723 0.4094 MMTGFPNWWSMHPPPQYVLPPSSISFNFLSENPEPPHSWTQLLSGLPGEEENLCFIDFQPKKLGNWDVQILNTASGVSNNFDALKQENCERGNLYEHGREEFQASDPADSSWSHMVPVSSPGSSCVSSISGNNILDFTYNNSEHRKNLLQNQTSECNSTGRVGVCKKARVQSCSSQAPLKVRKEKLSDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEVMFLAIFFPLMLFIRL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02550 240 CDD bHLH_AtbHLH_like 180 226 IPR045239 -
Phac5g02550 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Phac5g02550 240 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 226 - -
Phac5g02550 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 228 IPR036638 GO:0046983
Phac5g02550 240 Gene3D - 180 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02550 Phac-Chr5 43261148 43264867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02550 28 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 37.500 4.83e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02550 - - vun:114183597 342.043