Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02549 ATGATGACTGGGTTTCCTAACTGGTGGAGCATGCATCCACCACCCCAATATGTGCTTCCACCTTCTTCAATTTCTTTTAATTTTTTGTCTGAAAATCCAGAGCCTCCTCACTCATGGACCCAACTACTTTCTGGATTACCAGGAGAAGAAGAGAATCTTTGCTTCATTGATTTTCAGCCGAAAAAGTTGGGAAACTGGGATGTTCAAATTCTTAACACTGCTTCCGGAGTTTCTAATAATTTTGATGCATTAAAGCAAGAAAATTGTGAAAGGGGCAATTTGTACGAACATGGGCGTGAAGAATTTCAGGCTTCTGATCCCGCTGATTCATCTTGGTCACATATGGTGCCTGTTTCTTCTCCCGGGTCTTCTTGTGTCTCTAGCATCAGTGGTAACAATATATTGGATTTCACCTATAACAACTCAGAACATAGAAAAAATCTCTTACAAAACCAAACATCCGAGTGCAATAGCACAGGCAGAGTTGGAGTTTGCAAGAAAGCTAGGGTTCAGTCATGTTCAAGTCAAGCACCTCTGAAGGTGCGGAAGGAGAAGCTAAGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTGAGCTCTCCTTACGTGGACGATGCATCAAAAAACATGAGGAATCAACAGTCTCTGTTGAATGGCAATAATGGCCTGAAAAGAAAAGGAGCTCCAAACCAGGATGCAGAAGATAAAGCAAAGGACTTGAAGAGTAGAGGGTTGTGCTTGGTTCCGGTGTCTTGTACCCAACATGTTGTGAGCTTAAGTGACTGGAGCACCGCCATATACGGCGGAGGATTTTAA 900 0.4289 MMTGFPNWWSMHPPPQYVLPPSSISFNFLSENPEPPHSWTQLLSGLPGEEENLCFIDFQPKKLGNWDVQILNTASGVSNNFDALKQENCERGNLYEHGREEFQASDPADSSWSHMVPVSSPGSSCVSSISGNNILDFTYNNSEHRKNLLQNQTSECNSTGRVGVCKKARVQSCSSQAPLKVRKEKLSDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYVDDASKNMRNQQSLLNGNNGLKRKGAPNQDAEDKAKDLKSRGLCLVPVSCTQHVVSLSDWSTAIYGGGF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02549 299 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 283 - -
Phac5g02549 299 Gene3D - 180 246 IPR036638 GO:0046983
Phac5g02549 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Phac5g02549 299 MobiDBLite consensus disorder prediction 241 263 - -
Phac5g02549 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 230 IPR036638 GO:0046983
Phac5g02549 299 CDD bHLH_AtbHLH_like 180 227 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02549 Phac-Chr5 43261148 43264867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02549 164 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 56.667 1.51e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02549 - - vun:114183597 435.647