Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02548 ATGATGACTGGGTTTCCTAACTGGTGGAGCATGCATCCACCACCCCAATATGTGCTTCCACCTTCTTCAATTTCTTTTAATTTTTTGTCTGAAAATCCAGAGCCTCCTCACTCATGGACCCAACTACTTTCTAGTGGATTACCAGGAGAAGAAGAGAATCTTTGCTTCATTGATTTTCAGCCGAAAAAGTTGGGAAACTGGGATGTTCAAATTCTTAACACTGCTTCCGGAGTTTCTAATAATTTTGATGCATTAAAGCAAGAAAATTGTGAAAGGGGCAATTTGTACGAACATGGGCGTGAAGAATTTCAGGCTTCTGATCCCGCTGATTCATCTTGGTCACATATGGTGCCTGTTTCTTCTCCCGGGTCTTCTTGTGTCTCTAGCATCAGTGGTAACAATATATTGGATTTCACCTATAACAACTCAGAACATAGAAAAAATCTCTTACAAAACCAAACATCCGAGTGCAATAGCACAGGCAGAGTTGGAGTTTGCAAGAAAGCTAGGGTTCAGTCATGTTCAAGTCAAGCACCTCTGAAGGTGCGGAAGGAGAAGCTAAGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTGAGCTCTCCTTACGTGGACGATGCATCAAAAAACATGAGGAATCAACAGTCTCTGTTGAATGGCAATAATGGCCTGAAAAGAAAAGGAGCTCCAAACCAGGATGCAGAAGATAAAGCAAAGGACTTGAAGAGTAGAGGGTTGTGCTTGGTTCCGGTGTCTTGTACCCAACATGTTGTGAGCTTAAGTGACTGGAGCACCGCCATATACGGCGGAGGATTTTAA 903 0.4286 MMTGFPNWWSMHPPPQYVLPPSSISFNFLSENPEPPHSWTQLLSSGLPGEEENLCFIDFQPKKLGNWDVQILNTASGVSNNFDALKQENCERGNLYEHGREEFQASDPADSSWSHMVPVSSPGSSCVSSISGNNILDFTYNNSEHRKNLLQNQTSECNSTGRVGVCKKARVQSCSSQAPLKVRKEKLSDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYVDDASKNMRNQQSLLNGNNGLKRKGAPNQDAEDKAKDLKSRGLCLVPVSCTQHVVSLSDWSTAIYGGGF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02548 300 Gene3D - 181 247 IPR036638 GO:0046983
Phac5g02548 300 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 284 - -
Phac5g02548 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Phac5g02548 300 MobiDBLite consensus disorder prediction 242 264 - -
Phac5g02548 300 CDD bHLH_AtbHLH_like 181 228 IPR045239 -
Phac5g02548 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 231 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02548 Phac-Chr5 43261148 43264867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02548 165 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 56.667 1.60e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02548 - - vun:114183597 437.573