LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g02522	ATGAGAAGAAGCGCGTTTCCCTCTCTATTGCTCCTCCTTCTACTTCACCCTTCTGAAGGTGAAGACATTGCCACTTACTGGGGTCAAAACCCCTATGAGGGAAACCTTACAGAAACATGTGCAACAGGAAAATACTCCTACGTCAACATAGCCTTCCTTACCACCTTTGGGAATGGCCAAACCCCAAAACTGGCCCTTTCGGCTAATCATTGTGACGCAGCATCTTCTAATGGGTGCACTGAGATCGGAAGAGATATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAAGTAGTGATGAATACTCTATAACTTCCATTGAGGATGCCAAGAATGTTTCGGATTACTTGTGGAACAATTTCCTGGGTGGCTCATCCTCATCACGCCCATTTGGGGATGTAGTCTTAGATGGCATTGACTTTGACATACGGACAGGTGAACCATCGTTTCTGGGAAACCTTTCCCTTCAACTCGTTTCATATTCACAGACACGCAAAGTGTACCTGTCAGCAACTCCTCGGTGTCCATTTCCTGATGCTACGCTGGGTTCCGCCCTTGCTACTGCCCTTTTTGACTATGTCTGGATACAATTCTACAACAATCCTTCATGCGAATATACCCAAAACAATTTCGACAACTTCCTTAAAGTATGGAACCGTTGGTCCTCGTCATTGAATGCAGGGAAAATATTTCTGGGGCTAGCAGCAGATCAAGCTGCAGCTATAAGCGGTTATGTTTCAGCTGATGTATTAGTTTCGAAGATCTTGCCTGCAGTAAAGGAGTCACCAAATTATGGAGGTGTCATGTTGTGGTCAAGGTACGAGGATAAAATGAGTGGATACAGCTCCTACATTCAAAATTTTCACAGAAATCTGACTCTACGCTCTGTGTGCACACCTCAAAGCCTTCCTTCCTGCAGGAGCTCTGAAGGTCATTTCGTGGAAAGTGTTGGTAACATGTCAACCGTTGGCATTCAAGTTTATGCAGGCAGCAATGGTACGCAGTGTTGTGAGGTCATATGCAGGAACAATTGTTCCTGTCAAGCATATGCCCCAATAAACCACAAAAACAATACTGGGTGTCAGATATGGCTCAAAGGAACACAATTTGTTAGAGCCTCTGTAGACATAGCACGGCCCATCTATGTTTCTGTTGCACTGCTCCCGGAAGACAAAAGTACATCCAGATTCCCTACCACAAAAGTAAACCGGTTGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATGCCTGTAATTTTCTATTTATGGCGTGTCTTGTGGAGAAATTACAGAGCTAAAGTGGAGAGAAAGAAGATGCAGAAGAAGTTATTACATGACATTGGAGGTAATTCCAGAAAAAGTAAGAACAAGGGAAAGACAAGCAATGGGGTTGAAATATTCACCTTTGAAACCATTGTGGCTGCAACAGAGAATTTCTCAGCAGCTAATAAGCTAGGAGAGGGTGGATTCGGTCCTGTTTATAAGGGAACACTAAGTGATCAGCAAGAAGTAGCAATCAAGCGACTTTCTAAGAGTTCAGGACAGGGGGTAATGGAATTTAAGAATGAAGCCAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAACTTCTAGGATTCTGCATCCAGAGAGATGAAAGAATATTGGTTTATGAATACATGCCTAACAAAAGCTTAGATTTTTACCTATTTGATTCAGCTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTACACAAGTACTCGAGACTAAAGGTGATACATCGAGACCTGAAAGCAGGTAATATATTGCTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGTCTGGCTCGAATATTTGGTGTAAGGGCATCAGAAGAAAACACAAACAGAGTTGTTGGCACATATGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTACTAGAAATATTTATTGGCAAGAAAAATAATAGTCGTTATGATTCAGATCGTACACTCAACCTCATAGGATATGTGTGGCAGCTCTGGAATGAAGGCAGAAGTCTGGAGTTGATAGACCCAGATTCGCATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCAACAGATAGACCAACCATGGCAGACATTGTTTCATTTCTATCAAATGATACAGTGGAACTTCCTCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTGGAAGACTCAGAGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAACGACTTAACACTTTCTAGCACACATGGAAGATAA	2418	0.4239	MRRSAFPSLLLLLLLHPSEGEDIATYWGQNPYEGNLTETCATGKYSYVNIAFLTTFGNGQTPKLALSANHCDAASSNGCTEIGRDIRNCQKQGIKVMLSIGGSSDEYSITSIEDAKNVSDYLWNNFLGGSSSSRPFGDVVLDGIDFDIRTGEPSFLGNLSLQLVSYSQTRKVYLSATPRCPFPDATLGSALATALFDYVWIQFYNNPSCEYTQNNFDNFLKVWNRWSSSLNAGKIFLGLAADQAAAISGYVSADVLVSKILPAVKESPNYGGVMLWSRYEDKMSGYSSYIQNFHRNLTLRSVCTPQSLPSCRSSEGHFVESVGNMSTVGIQVYAGSNGTQCCEVICRNNCSCQAYAPINHKNNTGCQIWLKGTQFVRASVDIARPIYVSVALLPEDKSTSRFPTTKVNRLYIWLIVGVAAAFAMPVIFYLWRVLWRNYRAKVERKKMQKKLLHDIGGNSRKSKNKGKTSNGVEIFTFETIVAATENFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGVMEFKNEAKLMAKLQHTHLVKLLGFCIQRDERILVYEYMPNKSLDFYLFDSARKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGLARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEIFIGKKNNSRYDSDRTLNLIGYVWQLWNEGRSLELIDPDSHELCPQNAVLRCIHIGLLCVQDQATDRPTMADIVSFLSNDTVELPQPKQPAFFINVVVEDSELPYSRQELHSSNDLTLSSTHGR*	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g02522	805	CDD	STKc_IRAK	493	758	-	-
	Phac5g02522	805	Gene3D	Phosphorylase Kinase; domain 1	460	562	-	-
	Phac5g02522	805	SUPERFAMILY	(Trans)glycosidases	19	290	IPR017853	-
	Phac5g02522	805	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	563	766	-	-
	Phac5g02522	805	ProSiteProfiles	Protein kinase domain profile.	487	773	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02522	805	Gene3D	Glycosidases	21	294	-	-
	Phac5g02522	805	CDD	GH18_hevamine_XipI_class_III	22	292	IPR045321	-
	Phac5g02522	805	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	21	300	IPR001223	GO:0005975
	Phac5g02522	805	FunFam	Acidic endochitinase SE2	21	294	-	-
	Phac5g02522	805	SUPERFAMILY	Protein kinase-like (PK-like)	470	789	IPR011009	-
	Phac5g02522	805	Pfam	Domain of unknown function (DUF3403)	760	805	IPR021820	GO:0004674
	Phac5g02522	805	SMART	serkin_6	487	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02522	805	Pfam	Glycosyl hydrolases family 18	23	281	IPR001223	GO:0005975
	Phac5g02522	805	Pfam	PAN-like domain	336	371	IPR003609	-
	Phac5g02522	805	Gene3D	Transferase(Phosphotransferase) domain 1	563	769	-	-
	Phac5g02522	805	Pfam	Protein tyrosine and serine/threonine kinase	490	758	IPR001245	GO:0004672\|GO:0006468
	Phac5g02522	805	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	312	796	-	-
	Phac5g02522	805	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	608	620	IPR008271	GO:0004672\|GO:0006468
	Phac5g02522	805	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	453	562	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g02522	Phac-Chr5	43139200	43145408	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g02522	477	773	Receptor kinase-like Gene Family	AT4G23230	60.943	4.37e-126	390

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g02522		PK_Tyr_Ser-Thr	6.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g02522	-		-	gmx:100794508	1157.13