LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g02520	ATGAGAAGAAGCGCGTTTCCCTCTCTATTGCTCCTCCTTCTACTTCACCCTTCTGAAGGTGAAGACATTGCCACTTACTGGGGTCAAAACCCCTATGAGGGAAACCTTACAGAAACATGTGCAACAGGAAAATACTCCTACGTCAACATAGCCTTCCTTACCACCTTTGGGAATGGCCAAACCCCAAAACTGGCCCTTTCGGCTAATCATTGTGACGCAGCATCTTCTAATGGGTGCACTGAGATCGGAAGAGATATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAAGTAGTGATGAATACTCTATAACTTCCATTGAGGATGCCAAGAATGTTTCGGATTACTTGTGGAACAATTTCCTGGGTGGCTCATCCTCATCACGCCCATTTGGGGATGTAGTCTTAGATGGCATTGACTTTGACATACGGACAGCAACTCCTCGGTGTCCATTTCCTGATGCTACGCTGGGTTCCGCCCTTGCTACTGCCCTTTTTGACTATGTCTGGATACAATTCTACAACAATCCTTCATGCGAATATACCCAAAACAATTTCGACAACTTCCTTAAAGTATGGAACCGTTGGTCCTCGTCATTGAATGCAGGGAAAATATTTCTGGGGCTAGCAGCAGATCAAGCTGCAGCTATAAGCGGTTATGTTTCAGCTGATGTATTAGTTTCGAAGATCTTGCCTGCAGTAAAGGAGTCACCAAATTATGGAGGTGTCATGTTGTGGTCAAGGTACGAGGATAAAATGAGTGGATACAGCTCCTACATTCAAAATTTTCACAGAAATCTGACTCTACGCTCTGTGTGCACACCTCAAAGCCTTCCTTCCTGCAGGAGCTCTGAAGGTCATTTCGTGGAAAGTGTTGGTAACATGTCAACCGTTGGCATTCAAGTTTATGCAGGCAGCAATGGTACGCAGTGTTGTGAGGTCATATGCAGGAACAATTGTTCCTGTCAAGCATATGCCCCAATAAACCACAAAAACAATACTGGGTGTCAGATATGGCTCAAAGGAACACAATTTGTTAGAGCCTCTGTAGACATAGCACGGCCCATCTATGTTTCTGTTGCACTGCTCCCGGAAGACAAAAGTACATCCAGATTCCCTACCACAAAAGTAAACCGGTTGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATGCCTGTAATTTTCTATTTATGGCGTGTCTTGTGGAGAAATTACAGAGCTAAAGTGGAGAGAAAGAAGATGCAGAAGAAGTTATTACATGACATTGGAGGTAATTCCAGAAAAAGTAAGAACAAGGGAAAGACAAGCAATGGGGTTGAAATATTCACCTTTGAAACCATTGTGGCTGCAACAGAGAATTTCTCAGCAGCTAATAAGCTAGGAGAGGGTGGATTCGGTCCTGTTTATAAGGGAACACTAAGTGATCAGCAAGAAGTAGCAATCAAGCGACTTTCTAAGAGTTCAGGACAGGGGGTAATGGAATTTAAGAATGAAGCCAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAACTTCTAGGATTCTGCATCCAGAGAGATGAAAGAATATTGGTTTATGAATACATGCCTAACAAAAGCTTAGATTTTTACCTATTTGATTCAGCTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTACACAAGTACTCGAGACTAAAGGTGATACATCGAGACCTGAAAGCAGGTAATATATTGCTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGTCTGGCTCGAATATTTGGTGTAAGGGCATCAGAAGAAAACACAAACAGAGTTGTTGGCACATATGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTACTAGAAATATTTATTGGCAAGAAAAATAATAGTCGTTATGATTCAGATCGTACACTCAACCTCATAGGATATGTGTGGCAGCTCTGGAATGAAGGCAGAAGTCTGGAGTTGATAGACCCAGATTCGCATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCAACAGATAGACCAACCATGGCAGACATTGTTTCATTTCTATCAAATGATACAGTGGAACTTCCTCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTGGAAGACTCAGAGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAACGACTTAACACTTTCTAGCACACATGGAAGATAA	2343	0.423	MRRSAFPSLLLLLLLHPSEGEDIATYWGQNPYEGNLTETCATGKYSYVNIAFLTTFGNGQTPKLALSANHCDAASSNGCTEIGRDIRNCQKQGIKVMLSIGGSSDEYSITSIEDAKNVSDYLWNNFLGGSSSSRPFGDVVLDGIDFDIRTATPRCPFPDATLGSALATALFDYVWIQFYNNPSCEYTQNNFDNFLKVWNRWSSSLNAGKIFLGLAADQAAAISGYVSADVLVSKILPAVKESPNYGGVMLWSRYEDKMSGYSSYIQNFHRNLTLRSVCTPQSLPSCRSSEGHFVESVGNMSTVGIQVYAGSNGTQCCEVICRNNCSCQAYAPINHKNNTGCQIWLKGTQFVRASVDIARPIYVSVALLPEDKSTSRFPTTKVNRLYIWLIVGVAAAFAMPVIFYLWRVLWRNYRAKVERKKMQKKLLHDIGGNSRKSKNKGKTSNGVEIFTFETIVAATENFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGVMEFKNEAKLMAKLQHTHLVKLLGFCIQRDERILVYEYMPNKSLDFYLFDSARKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGLARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEIFIGKKNNSRYDSDRTLNLIGYVWQLWNEGRSLELIDPDSHELCPQNAVLRCIHIGLLCVQDQATDRPTMADIVSFLSNDTVELPQPKQPAFFINVVVEDSELPYSRQELHSSNDLTLSSTHGR*	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g02520	780	Gene3D	Phosphorylase Kinase; domain 1	435	537	-	-
	Phac5g02520	780	CDD	GH18_hevamine_XipI_class_III	22	267	IPR045321	-
	Phac5g02520	780	SUPERFAMILY	(Trans)glycosidases	18	266	IPR017853	-
	Phac5g02520	780	SUPERFAMILY	Protein kinase-like (PK-like)	445	764	IPR011009	-
	Phac5g02520	780	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	21	275	IPR001223	GO:0005975
	Phac5g02520	780	Pfam	PAN-like domain	311	346	IPR003609	-
	Phac5g02520	780	Gene3D	Glycosidases	151	267	-	-
	Phac5g02520	780	SMART	serkin_6	462	733	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02520	780	Gene3D	Transferase(Phosphotransferase) domain 1	538	744	-	-
	Phac5g02520	780	Pfam	Domain of unknown function (DUF3403)	735	780	IPR021820	GO:0004674
	Phac5g02520	780	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	538	741	-	-
	Phac5g02520	780	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	341	771	-	-
	Phac5g02520	780	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	428	537	-	-
	Phac5g02520	780	Pfam	Protein tyrosine and serine/threonine kinase	465	733	IPR001245	GO:0004672\|GO:0006468
	Phac5g02520	780	Pfam	Glycosyl hydrolases family 18	23	149	IPR001223	GO:0005975
	Phac5g02520	780	CDD	STKc_IRAK	468	733	-	-
	Phac5g02520	780	Gene3D	Glycosidases	21	150	-	-
	Phac5g02520	780	ProSiteProfiles	Protein kinase domain profile.	462	748	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02520	780	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	583	595	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g02520	Phac-Chr5	43139200	43145408	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g02520	452	748	Receptor kinase-like Gene Family	AT4G23230	60.943	2.71e-126	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g02520		PK_Tyr_Ser-Thr	6.4e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g02520	-		-	gmx:100794508	1131.7