Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02501 ATGACTCGGCGGTGCTCCCACTGCAGCAACAACGGCCACAACTCCCGGACCTGCCCCTCGTCGCGGGGGGCGCCCGCCGGCGTCAAGCTCTTCGGGGTCAGGCTCACCGATGGATCAATCATAAAGAAGAGCGCCAGTATGGGAAACCTTAACCTCGCCTCCTCCGCACACCACCATTCTTCTCCTTCTTCTTCCAACCTCGCCGCCTCCTCTCCCAATCCAAGCTCTCCCTGCTCCGACCCGCTCCATGAGCCTCACGGTTACTTGTCCGACGACCCCGCCCATATCTCCACCTTGGCTAACCGCCGCGGAGAAAGAAAAAAAGGTGTTGCATGGACTGAAGAAGAACATAGGCTGTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTATCAAGGACCCCAACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGGCAAAGTCATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGACTTCAGATCCACCTTCAGTACCAGAAGAACAAGTGCTGCTTCCACCTTCTGAGAAGCCGCAACCTTGTAATGGAAAATCACAGCCTTCACTAAATCTCTCCCTCAAATCAGAATTTGAACCCATGGAAATTACTTCTCAAGAAAACATGGAACAGGCCAATGAAACTATGATGGGATCAAACGGACTGACATCAATGGCTCCTCATGGATTCTTCCCCACTTATTTACCTGTTCCATATCCCATATGGCCATCAACTGCAGCTCCTTTTGAAGAAGTTAAGGGAGGAGAGACATCCCATCATCAGGTCCACAGGCCAATCCCAGTCATTCCCAAGGAACCTGTCAATGTTGACGAACTTGTGGGAATGTCTCATCTCAGCATTGGGGAAACACAGGTACGTGATAGAGAACCTTCCCCGCTTTCCTTAAAGTTGTTAGGGGAACCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCGGATTTAAAAACTGGCAAGAACAAAGCAATTCAAGCGGTTTGA 1068 0.5019 MTRRCSHCSNNGHNSRTCPSSRGAPAGVKLFGVRLTDGSIIKKSASMGNLNLASSAHHHSSPSSSNLAASSPNPSSPCSDPLHEPHGYLSDDPAHISTLANRRGERKKGVAWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDMTSDPPSVPEEQVLLPPSEKPQPCNGKSQPSLNLSLKSEFEPMEITSQENMEQANETMMGSNGLTSMAPHGFFPTYLPVPYPIWPSTAAPFEEVKGGETSHHQVHRPIPVIPKEPVNVDELVGMSHLSIGETQVRDREPSPLSLKLLGEPSRQSAFHANAPVGGSDLKTGKNKAIQAV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02501 355 SUPERFAMILY Homeodomain-like 106 160 IPR009057 -
Phac5g02501 355 MobiDBLite consensus disorder prediction 53 94 - -
Phac5g02501 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 160 IPR017930 -
Phac5g02501 355 MobiDBLite consensus disorder prediction 173 209 - -
Phac5g02501 355 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
Phac5g02501 355 ProSiteProfiles Myb-like domain profile. 104 156 IPR001005 -
Phac5g02501 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 257 - -
Phac5g02501 355 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g02501 355 FunFam transcription factor MYB1R1 110 161 - -
Phac5g02501 355 CDD SANT 111 156 IPR001005 -
Phac5g02501 355 Gene3D - 110 161 - -
Phac5g02501 355 MobiDBLite consensus disorder prediction 332 355 - -
Phac5g02501 355 ProSiteProfiles SANT domain profile. 112 160 IPR017884 -
Phac5g02501 355 MobiDBLite consensus disorder prediction 1 23 - -
Phac5g02501 355 MobiDBLite consensus disorder prediction 53 77 - -
Phac5g02501 355 SMART sant 108 158 IPR001005 -
Phac5g02501 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 107 159 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02501 Phac-Chr5 43014509 43019961 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac5g02501 Myb_DNA-binding 9.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02501 - - gmx:778036 589.341