Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02491 ATGAATCATTCAACAAAACACCGTTTGAGGTTGTTACTATTACATATAATTCTGCTTCGTCTTTGTTGCACAAGTTCTTATCCCACGCCAACAAACTGCACCGACACAAGCCGCGTTTGTACTTCGTTCTTGGCCTTCAAGCCTAAACCAAACCAAACCTTGCCTGTGATACAAAGCATGTTTGATGTGTTGCCCAGTGATATCACTGTCGAAGACAATGACTGGGATTATTTATTCATCAGAAAAAACTGTTCTTGTGATGCTGGTATGAAGAAGTTTGTGTCTAACACCACACTCACAGTGAAATCCAATGGAGGGTTTGTGCATGATTTGGTGAAGGAAGCCTATGATGGGCTTGCTCTCTTGCCCAACACGACACATTGGGCAAGAAAAGATCATGGTGTCATACCGCTGAACTTGTTCTGTAGCTGCTCCAGTGGACTGTGGAACTATTTGATGAGCTATGTCATCAGAGATGGGGATAGTGTCGAATCACTAGCAAGCCGGTTTGGGGTTAGTATGGATAGCATTGAGACAGTGAATGGCATTGACAATCCTGGTAGCTTCACTGTTGGTTCTCTCTATTATATACCTTTGAATTCGGTTCCTGGTGAGCTTTATCACTTGAAGAATGACACTTCTCCAGTTCCAGTCCCTTCACCATCTGTAGATGAAATTTCAGCTGACCAAATCAACCAGAAGGATCGTGTACCCCATGAATGGATCGTAGGAGGTTTTGGGGTTGGTCTTGCTCTGATAATATTAAGCATTATTGTCTGTGTGTCCCTGAGATCACCCAATTGCTTGGTTGAAGCCAGAAATAATGCGAAAAATTCTGCAGGAAAGATCTCTAATAAGTTCTATGTTTTTGGCAATCCAAAATTGTTTTGTGGATGTGGCAAACCTGTGGACCAGAAGCAAACTGATGGTGAAACCAGTAATCACCAAAGTACCGTTACCAAAGCATCTTCGTGTAATCACCCTACTAATTGGATTGGACTCTCGACTCTGGTACCTGACATGTTGGACATGGATAGGCCTGTGCTTTTTTCATATGACGAGATTTTTGCCTCAACCGATGGTTTCTCTGATTCAAATCTACTTGGGCAGAAAACATATGGTTCTGTTTACTATGGTCTCCTTCGTGATCAGGAAGTTGCTATTAAAAGAATTACAGCTACTAAAACTAAAGAGTTTATGTCAGAGATAAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATCGGCTATGCGGCTAGTCATGATGATTTTTTCCTTATTTATGAATATGCTCAGAAGGGTTCACTCAGCAGCCATTTGCATGATACTCAAAATAAGGGTCATTCATCTCTTCCTTGGATCACAAGGGTCCAGATTGCACTTGATGCTGCTAAGGCCCTTGAATACATACATGAACATACAAAAACTCGCTACGTCCATCAAGATATCAAGACAAGCAACATTTTACTTGATGTTTCTTTTAGAGCCAAGATATCAGATTTTGGGTTAGCAAAACTAGTTGGTAAAACAAATGAGGGAGAAACCACAGCATCCAATGCTGTAAATGCATATGGATATCTCGCTCCAGAATACTTTAGCAATGGCCTTGCAACGACCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTTTTTGAGGTTATGTCAGGGAAGGAGGCCATCATTCAAACAGAAGGTCCTGAAAAACGATCATTGGCATCTAGTATGTTGGCAATTCTTAGGAACTCACCTGATTCCGTTAGCATGTCGAGCACAAGAAACCTCGTTGATCCTACTATGATGGATCTGTATCCCCATGATTGTGTGCACAAGATGGCCATGCTGGCAAAGCAATGTGTGGAAAAGGATCCCGTATTACGCCCTGACATGAAGCAAGTTGTGATTTCCCTCTCACAAATCCTGCTGTCCTCTGTTGAGTGGGAAGCTACTCTTGCCGGGAACAGCCAGGTATTCAGCGGTCTTGTCCAGGGAAGATAG 2004 0.4222 MNHSTKHRLRLLLLHIILLRLCCTSSYPTPTNCTDTSRVCTSFLAFKPKPNQTLPVIQSMFDVLPSDITVEDNDWDYLFIRKNCSCDAGMKKFVSNTTLTVKSNGGFVHDLVKEAYDGLALLPNTTHWARKDHGVIPLNLFCSCSSGLWNYLMSYVIRDGDSVESLASRFGVSMDSIETVNGIDNPGSFTVGSLYYIPLNSVPGELYHLKNDTSPVPVPSPSVDEISADQINQKDRVPHEWIVGGFGVGLALIILSIIVCVSLRSPNCLVEARNNAKNSAGKISNKFYVFGNPKLFCGCGKPVDQKQTDGETSNHQSTVTKASSCNHPTNWIGLSTLVPDMLDMDRPVLFSYDEIFASTDGFSDSNLLGQKTYGSVYYGLLRDQEVAIKRITATKTKEFMSEIKVLCKVHHANLVELIGYAASHDDFFLIYEYAQKGSLSSHLHDTQNKGHSSLPWITRVQIALDAAKALEYIHEHTKTRYVHQDIKTSNILLDVSFRAKISDFGLAKLVGKTNEGETTASNAVNAYGYLAPEYFSNGLATTKSDVYAFGVVLFEVMSGKEAIIQTEGPEKRSLASSMLAILRNSPDSVSMSSTRNLVDPTMMDLYPHDCVHKMAMLAKQCVEKDPVLRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02491 667 SUPERFAMILY LysM domain 153 198 IPR036779 -
Phac5g02491 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Phac5g02491 667 Gene3D Phosphorylase Kinase; domain 1 339 433 - -
Phac5g02491 667 ProSiteProfiles Protein kinase domain profile. 362 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02491 667 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Phac5g02491 667 SMART LysM_2 154 198 IPR018392 -
Phac5g02491 667 Gene3D LysM domain 150 205 IPR036779 -
Phac5g02491 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 24 661 IPR044812 GO:0019199|GO:0045087
Phac5g02491 667 Pfam Protein tyrosine and serine/threonine kinase 366 637 IPR001245 GO:0004672|GO:0006468
Phac5g02491 667 SUPERFAMILY Protein kinase-like (PK-like) 339 639 IPR011009 -
Phac5g02491 667 Gene3D Transferase(Phosphotransferase) domain 1 435 654 - -
Phac5g02491 667 Pfam LysM domain 155 187 IPR018392 -
Phac5g02491 667 SMART serkin_6 362 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02491 667 FunFam PTI1-like tyrosine-protein kinase 3 434 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02491 Phac-Chr5 42982739 42988517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02491 30 667 Receptor kinase-like Gene Family AT1G51940 59.304 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac5g02491 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02491 - - vra:106762524 1144.8