Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02485 ATGGGCAAGGCTACTAGATGGTTGAAGGGGTTGCTGGGAATAAAGAAAGAGAGAGACTACTGTGGCTATTCGGGCTCACTGGCTCCTGACAAGAGAGAAAAGAAACAATCACAGAAGGATGGAGAGAGTCACATTACACCATCCACCCTTGATCATACTAGACACAGATTCTATGTTGCCAAAAAAGAGGGTGTGAAGAAGAAACAAGTTGAGAGATCAAGAAGATGTGGCAGAGACACCTTGCTAATTGGAAGCAAGGAGTGCTGGGCTGCTGTGTCAATTCAATCCTTTTTCAGAGGTTATTTGGCGCGAAAAGCTCTCAGAGCACTCAAAGGATTGGTTAAAATACAGGCTCTTGTTAGAGGGTATCTAGTTAGAAAAAGGGTTGCTGCAACTCTTCACAGTGTTCAAGCAATGATAAGATCTCAAGCTGTTGCTCGATCAGTTCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCAGAATCTCCTTCCAGAAAATATGTGCAACTGTTTGATGAAACAAGAAATTATCAATGTGGCAATAGAAGGGCAACCATATACTCTAAGGAGCCCTGGAATGGATTTGATGAGAGCTCAAAAGTTGTTGAGGTTGACACTCGCATGGCCCATTCAAGATGCAGGAGCATCAACACTGCAATGTCTGAATGTGGAGAGTATCAAGCAATGTCATCTTCTCTTCCATGTCCAGTTCAAGGTAGAATCTCACTTCATCAAAAACAGCACCCTCAAGAGTTTGAATGGTTCTTCAATCTTGATGAAGACAACAAGTTCTCCACAGCACACAACACACCTCGTTTACCAAAATGTATGATACCAGCTACTCCACTGAAGAGTGTTTGTGGGGATACCTTTAAGCCTTGCTCCAATTTTCCCAACTACATGGCCAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAACAAAGACCTGAACTAAGAAAAAGGCTTTCAATCAATGAAATTATGGCAGCCAGAAATAGTGTTACTGGTGTTGGAAAACAGTGGTCATCCAACCCAAAAACTCAAGATTACTACTTTTTTGACAAGGTTATGTAG 1098 0.4235 MGKATRWLKGLLGIKKERDYCGYSGSLAPDKREKKQSQKDGESHITPSTLDHTRHRFYVAKKEGVKKKQVERSRRCGRDTLLIGSKECWAAVSIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMIRSQAVARSVRARRSMDKENRFHPESPSRKYVQLFDETRNYQCGNRRATIYSKEPWNGFDESSKVVEVDTRMAHSRCRSINTAMSECGEYQAMSSSLPCPVQGRISLHQKQHPQEFEWFFNLDEDNKFSTAHNTPRLPKCMIPATPLKSVCGDTFKPCSNFPNYMANTHSSKAKLRSHSAPKQRPELRKRLSINEIMAARNSVTGVGKQWSSNPKTQDYYFFDKVM* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02485 365 Gene3D - 52 112 - -
Phac5g02485 365 Gene3D - 113 161 - -
Phac5g02485 365 SMART iq_5 109 130 IPR000048 GO:0005515
Phac5g02485 365 SMART iq_5 86 108 IPR000048 GO:0005515
Phac5g02485 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 130 IPR027417 -
Phac5g02485 365 MobiDBLite consensus disorder prediction 23 48 - -
Phac5g02485 365 Pfam Protein of unknown function (DUF4005) 267 343 IPR025064 -
Phac5g02485 365 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Phac5g02485 365 PANTHER IQ-DOMAIN 5-RELATED 1 338 - -
Phac5g02485 365 ProSiteProfiles IQ motif profile. 90 115 IPR000048 GO:0005515
Phac5g02485 365 Pfam IQ calmodulin-binding motif 114 128 IPR000048 GO:0005515
Phac5g02485 365 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515
Phac5g02485 365 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02485 Phac-Chr5 42945147 42947868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02485 1 345 IQD Protein Family AT3G16490 41.730 1.31e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02485 - - gmx:100797296 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02485 5 42945147 42947868 Phac5g02485 5 42945147 42947868 ECH
Phac5g02485 5 42945147 42947868 Phac10g01915 10 41516438 41519562 PCT