Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02484 ATGGGCAAGGCTACTAGATGGTTGAAGGGGTTGCTGGGAATAAAGAAAGAGAGAGACTACTGTGGCTATTCGGGCTCACTGGCTCCTGACAAGAGAGAAAAGAAACAATCACAGAAGGATGGAGAGAGTCACATTACACCATCCACCCTTGATCATACTAGACACAGATTCTATGTTGCCAAAAAAGAGGGTGTGAAGAAGAAACAAGTTGAGAGATCAAGAAGATGTGGCAGAGACACCTTGCTAATTGGAAGCAAGGAGTGCTGGGCTGCTGTGTCAATTCAATCCTTTTTCAGAGGTTATTTGGCGCGAAAAGCTCTCAGAGCACTCAAAGGATTGGTTAAAATACAGGCTCTTGTTAGAGGGTATCTAGTTAGAAAAAGGGTTGCTGCAACTCTTCACAGTGTTCAAGCAATGATAAGATCTCAAGCTGTTGCTCGATCAGTTCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCAGAATCTCCTTCCAGAAAATATGTGCAGCAACTGTTTGATGAAACAAGAAATTATCAATGTGGCAATAGAAGGGCAACCATATACTCTAAGGAGCCCTGGAATGGATTTGATGAGAGCTCAAAAGTTGTTGAGGTTGACACTCGCATGGCCCATTCAAGATGCAGGAGCATCAACACTGCAATGTCTGAATGTGGAGAGTATCAAGCAATGTCATCTTCTCTTCCATGTCCAGTTCAAGGTAGAATCTCACTTCATCAAAAACAGCACCCTCAAGAGTTTGAATGGTTCTTCAATCTTGATGAAGACAACAAGTTCTCCACAGCACACAACACACCTCGTTTACCAAAATGTATGATACCAGCTACTCCACTGAAGAGTGTTTGTGGGGATACCTTTAAGCCTTGCTCCAATTTTCCCAACTACATGGCCAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAACAAAGACCTGAACTAAGAAAAAGGCTTTCAATCAATGAAATTATGGCAGCCAGAAATAGTGTTACTGGTGTTGGAAAACAGTGGTCATCCAACCCAAAAACTCAAGATTACTACTTTTTTGACAAGGTTATGTAG 1101 0.4242 MGKATRWLKGLLGIKKERDYCGYSGSLAPDKREKKQSQKDGESHITPSTLDHTRHRFYVAKKEGVKKKQVERSRRCGRDTLLIGSKECWAAVSIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMIRSQAVARSVRARRSMDKENRFHPESPSRKYVQQLFDETRNYQCGNRRATIYSKEPWNGFDESSKVVEVDTRMAHSRCRSINTAMSECGEYQAMSSSLPCPVQGRISLHQKQHPQEFEWFFNLDEDNKFSTAHNTPRLPKCMIPATPLKSVCGDTFKPCSNFPNYMANTHSSKAKLRSHSAPKQRPELRKRLSINEIMAARNSVTGVGKQWSSNPKTQDYYFFDKVM* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02484 366 SMART iq_5 109 130 IPR000048 GO:0005515
Phac5g02484 366 SMART iq_5 86 108 IPR000048 GO:0005515
Phac5g02484 366 Gene3D - 52 112 - -
Phac5g02484 366 Gene3D - 113 161 - -
Phac5g02484 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 130 IPR027417 -
Phac5g02484 366 MobiDBLite consensus disorder prediction 23 48 - -
Phac5g02484 366 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Phac5g02484 366 PANTHER IQ-DOMAIN 5-RELATED 1 339 - -
Phac5g02484 366 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515
Phac5g02484 366 Pfam IQ calmodulin-binding motif 114 128 IPR000048 GO:0005515
Phac5g02484 366 ProSiteProfiles IQ motif profile. 90 115 IPR000048 GO:0005515
Phac5g02484 366 Pfam Protein of unknown function (DUF4005) 268 344 IPR025064 -
Phac5g02484 366 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02484 Phac-Chr5 42945147 42947868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02484 1 346 IQD Protein Family AT3G16490 41.371 6.11e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02484 - - gmx:100797296 534.258