Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02465 ATGTGGTGGCTGAGAAGCTTCCCTGAAGGAAAGAGGAACTGCTACAAAATAAGCATCACAAGAGGCTCTAAGTATCTCATCCGCACTACTTTTCTGTATGGAAATTATGATGGCCGAAATATGTTACCAATGTTTGATCTTCTTCTGGGAGCTAACCTGTGGGATACAGTCACTATAAAAAATGCATCCATTGACCAATCCAATGAGATCATACATGTACCTTCACAGAATTTCATACAAATATGTCTGGTTAACACAGGAAATGGTGCACCATTTATAACAGCCATAGAATTGAGAACTTTGAAAAATAATACATACGTTACTGAATCAGGATCACTGAAACGTTACCGGCGATACGATTTGGGTTCTAACATAAGCTACAGGTACTCGGTTGATGTTTATGATCGTTTCTGGTATGTCTGGGACAAAAAAGATTGGACAAAGCTAAGTGCTTCGATTCCAGATGATTCTTTAAAACAGAACGATTACCGACCGGGAGCAACCATCATGAGCACCGCAGTTACACCGGCAAATGATAGTGCTCCGTTGGTAATAAGATGGGAGCCAAAAGATGAAACTGAGGAATTCTATGTTTACATGCACTTCACGGAGATTCAAGTGTTAACCGGGAATCAGACAAGACAATTCAACATCATGAGCAACGGTGAATTATGGTTTCCAAATTGTTCTCCGCAGTACATGAAAGTCAACACTTTATATAGCAAGTCAGGCATCAGCGGGAAAGAAATTAAATTTTCCCTGGAGAGGACCGAAAATTCAACCCTGCCTCCCATCATCAGTGCCTTTGAAATTTATAAAGTAATAGACTTACAGAAACCTGAAACACTCCAAGAAGATGTTGATGCGATTACAAGCATAAAGTCAGTTTATGGAGTGAAAAGAGATTGGGAAGGAGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTCTCAATTGTTCTTATCACGGAATTGAGTCACCAAGAATCACAGCTTTGAATTTATCTTCCAGTGGATTGTCAGGAAAGATAGACCCTTCAATCTCAAAGCTCACCATGTTGGAGATGCTGGATTTATCTAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTGATTCATTTGCAACACTTGAAGATATTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCTGCACTTATTGAAAAATCACACGAAGGTTCTCTCTCACTAAGAATTATCGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATAACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAGGCCGAGGTTAAACTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTACTGTAACGAAGGAACCAACAAGGCTCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAATACAACGAATCACCAATCTTGAGCTGGAAGGACAGACTTCGTGTAGCAGTGGATGCAGCCCAAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCTACAAACATCTTGTTGGATGAACACTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAGTTGTCCCAGATGATGGGAGATCTCATGTGTCAACTATTGTTGCTGGTACTCTTGGTTATCTGGACCCTCACTACCACTCTTCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACCAATCAATCAGTAATGGCAGGGAATGAAGAAAATGGTCACATAAGTGAACGAGTTAGTTCCATGATATCAACAGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGGCTTGTGTTTCTCCAAATCCTAACGAAAGGCCAATTATGAGTGTGGTGGTGATTGAACTACAAGAGAGTTTGGCCACGGAATTAGCTAGAACAGAGCATAATAATGGTGGTGATCCTAGGTATTCAGTTGCGGCGGGGAGCGAGGATTTAGACACCGAATTCATGCCCTTACCTAGGTAA 2139 0.4058 MWWLRSFPEGKRNCYKISITRGSKYLIRTTFLYGNYDGRNMLPMFDLLLGANLWDTVTIKNASIDQSNEIIHVPSQNFIQICLVNTGNGAPFITAIELRTLKNNTYVTESGSLKRYRRYDLGSNISYRYSVDVYDRFWYVWDKKDWTKLSASIPDDSLKQNDYRPGATIMSTAVTPANDSAPLVIRWEPKDETEEFYVYMHFTEIQVLTGNQTRQFNIMSNGELWFPNCSPQYMKVNTLYSKSGISGKEIKFSLERTENSTLPPIISAFEIYKVIDLQKPETLQEDVDAITSIKSVYGVKRDWEGDPCAPAAYLWDGLNCSYHGIESPRITALNLSSSGLSGKIDPSISKLTMLEMLDLSNNNLNGEVPDFLIHLQHLKILNLEKNDLSGSIPSALIEKSHEGSLSLRIIGKGGFGTVYLGFIDNTPVAVKMLSPSAVHGYQQFQAEVKLLIRVHHKNLTSLIGYCNEGTNKALIYEYMAKGNLREHLSGKYNESPILSWKDRLRVAVDAAQGLEYLQNGCKPPIIHRDVKSTNILLDEHFQAKLSDFGLSKVVPDDGRSHVSTIVAGTLGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQSVMAGNEENGHISERVSSMISTGDIRAIVDSRLEGNFDINSAWKALEIAMACVSPNPNERPIMSVVVIELQESLATELARTEHNNGGDPRYSVAAGSEDLDTEFMPLPR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02465 712 CDD STKc_IRAK 410 675 - -
Phac5g02465 712 Gene3D Ribonuclease Inhibitor 287 406 IPR032675 -
Phac5g02465 712 MobiDBLite consensus disorder prediction 684 712 - -
Phac5g02465 712 Pfam Malectin-like domain 2 274 IPR024788 -
Phac5g02465 712 SMART serkin_6 404 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02465 712 Gene3D Transferase(Phosphotransferase) domain 1 480 693 - -
Phac5g02465 712 FunFam Leucine-rich repeat receptor-like kinase 285 411 - -
Phac5g02465 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Phac5g02465 712 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 479 686 - -
Phac5g02465 712 ProSiteProfiles Protein kinase domain profile. 404 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02465 712 PANTHER OS07G0107800 PROTEIN-RELATED 4 406 - -
Phac5g02465 712 ProSitePatterns Protein kinases ATP-binding region signature. 410 431 IPR017441 GO:0005524
Phac5g02465 712 SUPERFAMILY L domain-like 276 396 - -
Phac5g02465 712 Gene3D Phosphorylase Kinase; domain 1 410 479 - -
Phac5g02465 712 Pfam Protein tyrosine and serine/threonine kinase 408 670 IPR001245 GO:0004672|GO:0006468
Phac5g02465 712 SUPERFAMILY Protein kinase-like (PK-like) 397 671 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02465 Phac-Chr5 42764415 42768786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02465 1 686 Receptor kinase-like Gene Family AT1G51790 42.401 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac5g02465 Malectin_like 7.9e-95 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02465 - - var:108332944 874.004