Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02462 ATGCATATTTTGCATGTTTATGTTTTAGGATTCATCAGCATAGATTGCGGAGCCGAAGCAGGTGTCAACTATACTGAGCCATCACTAGAAATAAATTACGTTTCTGATGCAAATTTCATAAATACGGGTGTGAGAGGGATAATAACATCTGAAGAGATCAGCACACACACTCAACGACAACTGTGGAGGCTGAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATCAGCGTCACAAGAGGCTCTAGATATCTCATCCGCACCACTTTTCTGTATGGAAATTATGATGGCCAAAATATGCTACCACAGTTTGATCTTCTTCTTGGAGCTAACCTGTGGGGTACAGTGACTATAGACAATGCATCCATTGCCAAATCCAATGAGATCATACATGTACTTTCACTGGATTTCGTACAAATCTGTCTGGTAAACACAGGAAAGGGTACACCATTTATAACAGCCATTGAATTCAGGACTTTGATAAATCGTACATACGTCACTCCATTGGTATCGCTGGAATATTACATGCGGTGCGATTTGGGTTCTGACAGAAGCTACAGGTACTGGGCTGATGATTATGATCGTATCTGGTATACCTGTGACTTCGAAGAAGATTGGACACAGCTAAATGCCTCGATTCCTGACGATTCTTTTGTTGATAACGATTACAATCCGGGAGCAACCATCATGAGCACCGCAGTTACACCAGCAAACGGTAGTGCTCCGTTGGTAATAAGCTGGGAGCCAGAAGATGAAACTGAAGAATTCTATGTGTACTTGCACTTCATGGAGCTTCAAGTGTTAACCGAGAATCAGACAAGACAATTCAACATCAACGGTGCCATATGGTTTAAAAATTATTCTCCGTGGTACATGAGCGTGTTCACTTTATATAGCAGGTCAGCCAGCAGCGGGAAAGAAATTAAAATTTCCCTGGAGAGGACCAAAAATTCCACCCTACCTCCCATCCTCAATGCCATTGAAATTTACAGAGTAAAACAATTCCATCAATCTGATACATTCCAAGGAGATGTCGATGCGATTACAAGCATCAAGTCAGTTTATGCGGTGACAAGAGATTGGCAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGAATGGTGTCAATTGTTCTTATCACGGAATTGAATTCCCAAGAATCACAGCTTTGAATTTATCTTCAAGTGGATTGCATGGAAAGATTGACCCTTCAATTTCAAATCTCACCATGCTGGAGATGTTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTCTCACAACTGCAACACTTAAAGATCCTAAACTTGGAGAAGAATAACCTCTCTGGTTTGATTCCACCAGCACTAAATAAAGATTCCCTTCTACTACGTGTCGACCAAAATCCATATCTATGTGAAACTGATCAATGCAACAAGAAGAAAAACAATAGCACTGTTACGCCCATAGTAGCATCAGTTGGCGGGGTTTTGATCTTTGTGGTAGTAATGGCAGCTATATTGTGGACCGCTAAAAGAAGAAAAGCTAAAGCTTTGATGTTAAAAAAGGATCAAAGTGCCATATCACCGCAATACACTGAACAAAATGATTCCTCACTTCGATTCCAAAAACAAATATATTCATACTCTGATATCATTCAAATCACCAACAATTTCACTACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATCGAAGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCATCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTTATGAGAGTTCATCACAAAAATTTGACATCCCTTGTTGGTTACTGTAATGAAGGGACCAATAAGGGTCTCGTATACGAGTACATGGCCAATGGAAACTTACAAGAACATCTCTCTGGTAAACGAAGCAAAAGAAATTTCTTGAGCTGGGAAAAGAGACTTCGAATCGCAGTGGATGCAGCCTCAGGATTGGAGTATCTGCAAAATGGTTGTAAGCCACCAATATTCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACCTCCATGCAAAATTATCTGATTTTGGACTGTCCAAAGTTGTCCTAACAGATGAGGGAACTCATGTGTCAACTGTCATTGCTGGTACTCCTGGTTATCTAGACCCTGAATACTACCTAACCAGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGCGTTGTGCTTTTAGAGATAATCACAGGGCAACCAGTGATAGCAAAGAATGAGGAAAAAAGTCACATAAGTGAATGGGTTAGGTCCTTGATTGGGAAAGGTGATATCAATGCTATTGTTGACTCAAGGTTAGAAGGAGAGTTTGATAGTAACTCAGTTTGGAAAGTAGTAGAAATAGCAATGGCATGTGTATCTCCAAATCCCAACAGAAGGCCAATCATAAGCGTGGTAGTGAGATTCATCAGCATAGATTGCGGAGCCGAAGCAGGTGTCAACTATACCGAGCCATCATTAGACATAAATTATGTTTCAGATGCAAATTTCATAAATACTGGTGTGAGAGGGATAATAACATCTGAAGAGATCAGCAGACAGAGTCAACGACAACTGTGGAGGCTGAGAAGCTTCCCAGAAGGAAAAAGAAACTGCTACAAAATAAACGTCACAAGAGGCTCTAATTATCTCATCCGCACTGTTTTTCTGTATGGAAATTATGATGGCCGAAATATGCTACCACAGTTTGATCTTCTTCTGGGACCTAACCTGTGGGATACCGTCACTATAGACAATGCATCCATTGGCCAATCCAATGAGATCATACATGTACCTTCAATGGATTTCATACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTTATAACAGCCATTGAATTCAGGACTTTGAAAAATGATACATACGTCACCGAATCGGGATCACTGGAACTTTATAATTACCTGCGATGCGATTTGGGTTCTAACAGAGGCTACAGGTACTGGTCTGATGTTTATGATCGTTACTGGTATACCTGTGACTTCAAGGAAGATTGGACACAGCTAAGTGCTTCGATTTCAGATGATTCTTTTGATGAGAACGATTACAAACCGGGAACTACCATCATGAGCACCGCAGTTACACCAGCAAATGGTAGTGCTCCGTTGGTAATAAGCTGGGAGCCAGAAGATGAAACTCAGGAATTCTATGTGTACATGCACTTCACGGAGATCCAGGTGTTAACCAAGAATCAGACAAGACAATTCAACATCACCAAGAACGGTGACTCAGGGTGGGGGTTTCAAAATCTTTCTCCACAGTACCAGAGTGTCAATACTATATATACCCCGTCAGCCATCAGCGGAAAAGTAATTACATATTCACTGGAGAGGACCGAAAATTCTACCCTGCCACCCATCATCAATGCCATTGAAATTTACAGAGTAAAACAATTTCATCAATCTGATACATTCCAAGGAGATGTCGATGCGATTACAAGCATCAAGTCAGTTTATGCGGTGACAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCTTACTTGTGGGATGGTCTCAATTGTTCTTATCACGGAATTGAATCCCCAAGAATCACAGTTTTGAATTTATCTTCAAGTGGATTGCATGGAAAGATTAACCCTTCAATTTCAAATCTCACCATGCTGGAGATATTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTGTCACAACTGCAGCACTTAAAGATCCTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCACCAGCACTAAATAAAGATTCCCTCCTACTACGTGTTGACCAAAATCCATATCTCTGTGAACCTGATCAATGCAACAAGAAGAAAAACAAGAAACACAATAGCATTGTTACACCCATAGTAGCATCAGTTGGCGGGGTTTTGGTCCTTCTGGTAGTAGCTGCAGCTATATTGTGGACCGCTAAAAGAAGAAAAGCTAAAGCAGCTTTGATGTTAAAAAAGGATCAAAGTGCCATATCACCGCAATACACTGAACCAAATGATTCATCACTGCAATTCCAAAAACAAATATATTCATACTCTGATATCATTAAAATCACCAACAATTTCACTACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATCGAAGACACTCCAGTTGCAGTCAAAATGCTTTCCCCATCTTCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTTATGAGAGTTCATCACAAAAATTTGACCTCCCTTGTTGGTTACTGTAATGAAGGAACCAATAAGGGTCTCGTATATGAGTACATGGCCAACGGAAACTTACAACAACATCTCTCTGGTAAACGAAGCAAAACAAGTTTCTTCAGCTGGGAAAAGAGACTTCGAATCGCAGTGGATGCAGCCTCAGAGATAATCACAGGGCAACCAGTGATAGCGAAGAATGAAGAAAAAAGTCACATAAGTGAATGGGTTAGGTCCTTGATTGGGAAAGGTGATATCAATGCCATTGTTGACTCAAGGTTAGAAGGAGAGTTTGATAGTAACTCAGTATGGAAAGCAGTAGAAATAGCAACGGCTTGTGTATCTCCAATCAGCAACAGAAGGCCAAGCATAAGTGTGGTATTGAGTGAACTGAAGGAGTCTTTATCTTTAGCAATGGAATTAGCTCAAACTAAAGATAGAAGTAATGGTAGAGTTTATTTCCATTTACAATATATATTGATTGATTGA 4779 0.402 MHILHVYVLGFISIDCGAEAGVNYTEPSLEINYVSDANFINTGVRGIITSEEISTHTQRQLWRLRSFPEGKRNCYKISVTRGSRYLIRTTFLYGNYDGQNMLPQFDLLLGANLWGTVTIDNASIAKSNEIIHVLSLDFVQICLVNTGKGTPFITAIEFRTLINRTYVTPLVSLEYYMRCDLGSDRSYRYWADDYDRIWYTCDFEEDWTQLNASIPDDSFVDNDYNPGATIMSTAVTPANGSAPLVISWEPEDETEEFYVYLHFMELQVLTENQTRQFNINGAIWFKNYSPWYMSVFTLYSRSASSGKEIKISLERTKNSTLPPILNAIEIYRVKQFHQSDTFQGDVDAITSIKSVYAVTRDWQGDPCAPAAYLWNGVNCSYHGIEFPRITALNLSSSGLHGKIDPSISNLTMLEMLDLSNNSLNGEIPDFLSQLQHLKILNLEKNNLSGLIPPALNKDSLLLRVDQNPYLCETDQCNKKKNNSTVTPIVASVGGVLIFVVVMAAILWTAKRRKAKALMLKKDQSAISPQYTEQNDSSLRFQKQIYSYSDIIQITNNFTTIVGKGGFGTVYLGYIEDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGTNKGLVYEYMANGNLQEHLSGKRSKRNFLSWEKRLRIAVDAASGLEYLQNGCKPPIFHRDVKSTNILLNEHLHAKLSDFGLSKVVLTDEGTHVSTVIAGTPGYLDPEYYLTSRLTEKSDVYSFGVVLLEIITGQPVIAKNEEKSHISEWVRSLIGKGDINAIVDSRLEGEFDSNSVWKVVEIAMACVSPNPNRRPIISVVVRFISIDCGAEAGVNYTEPSLDINYVSDANFINTGVRGIITSEEISRQSQRQLWRLRSFPEGKRNCYKINVTRGSNYLIRTVFLYGNYDGRNMLPQFDLLLGPNLWDTVTIDNASIGQSNEIIHVPSMDFIQICLVNTGNGTPFITAIEFRTLKNDTYVTESGSLELYNYLRCDLGSNRGYRYWSDVYDRYWYTCDFKEDWTQLSASISDDSFDENDYKPGTTIMSTAVTPANGSAPLVISWEPEDETQEFYVYMHFTEIQVLTKNQTRQFNITKNGDSGWGFQNLSPQYQSVNTIYTPSAISGKVITYSLERTENSTLPPIINAIEIYRVKQFHQSDTFQGDVDAITSIKSVYAVTRDWEGDPCAPAAYLWDGLNCSYHGIESPRITVLNLSSSGLHGKINPSISNLTMLEILDLSNNSLNGEIPDFLSQLQHLKILNLEKNNLSGLIPPALNKDSLLLRVDQNPYLCEPDQCNKKKNKKHNSIVTPIVASVGGVLVLLVVAAAILWTAKRRKAKAALMLKKDQSAISPQYTEPNDSSLQFQKQIYSYSDIIKITNNFTTIVGKGGFGTVYLGYIEDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGTNKGLVYEYMANGNLQQHLSGKRSKTSFFSWEKRLRIAVDAASEIITGQPVIAKNEEKSHISEWVRSLIGKGDINAIVDSRLEGEFDSNSVWKAVEIATACVSPISNRRPSISVVLSELKESLSLAMELAQTKDRSNGRVYFHLQYILID* 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02462 1592 SUPERFAMILY L domain-like 1161 1275 - -
Phac5g02462 1592 ProSiteProfiles Protein kinase domain profile. 555 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02462 1592 Gene3D Phosphorylase Kinase; domain 1 542 629 - -
Phac5g02462 1592 PANTHER OS07G0107800 PROTEIN-RELATED 12 821 - -
Phac5g02462 1592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Phac5g02462 1592 Gene3D Ribonuclease Inhibitor 347 471 IPR032675 -
Phac5g02462 1592 Gene3D Ribonuclease Inhibitor 1165 1288 IPR032675 -
Phac5g02462 1592 FunFam Leucine-rich repeat receptor-like kinase 1163 1291 - -
Phac5g02462 1592 SUPERFAMILY Protein kinase-like (PK-like) 533 822 IPR011009 -
Phac5g02462 1592 ProSitePatterns Protein kinases ATP-binding region signature. 561 582 IPR017441 GO:0005524
Phac5g02462 1592 Pfam Protein tyrosine and serine/threonine kinase 558 822 IPR001245 GO:0004672|GO:0006468
Phac5g02462 1592 Pfam Protein tyrosine and serine/threonine kinase 1380 1485 IPR001245 GO:0004672|GO:0006468
Phac5g02462 1592 CDD STKc_IRAK 561 822 - -
Phac5g02462 1592 CDD TM_EGFR-like 481 513 - -
Phac5g02462 1592 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 630 834 - -
Phac5g02462 1592 SUPERFAMILY Protein kinase-like (PK-like) 1350 1485 IPR011009 -
Phac5g02462 1592 ProSiteProfiles Protein kinase domain profile. 1377 1592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02462 1592 Pfam Leucine Rich Repeat 1254 1273 IPR001611 GO:0005515
Phac5g02462 1592 Pfam Leucine Rich Repeat 436 455 IPR001611 GO:0005515
Phac5g02462 1592 ProSitePatterns Protein kinases ATP-binding region signature. 1383 1404 IPR017441 GO:0005524
Phac5g02462 1592 Pfam Malectin-like domain 826 1151 IPR024788 -
Phac5g02462 1592 Pfam Malectin-like domain 14 333 IPR024788 -
Phac5g02462 1592 SMART serkin_6 555 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02462 1592 Gene3D Transferase(Phosphotransferase) domain 1 630 830 - -
Phac5g02462 1592 Gene3D Transferase(Phosphotransferase) domain 1 1487 1583 - -
Phac5g02462 1592 Gene3D - 476 516 - -
Phac5g02462 1592 FunFam Leucine-rich repeat receptor-like kinase 345 473 - -
Phac5g02462 1592 Gene3D Transferase(Phosphotransferase) domain 1 1351 1486 - -
Phac5g02462 1592 SUPERFAMILY L domain-like 349 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02462 Phac-Chr5 42697231 42711484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02462 10 857 Receptor kinase-like Gene Family AT1G51800 47.079 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac5g02462 Malectin_like 2.2e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02462 - - pvu:PHAVU_005G162300g 1351.65