LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g02461	ATGGGAATGTTGAGGTGTTTCCTTGTTGGTTTTGTTGGTGGTCTAGTTCTTGCCGCACTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGACTGTGGAGCTACTGCAGATGTTAGCTTTACTGAGTCGAAAACGGGCATAAATTATACTTCAGATGCAAATTTAATAAATACTGGTGTGAGTATGTCAATAGAATCTGATCTCAAAAAGAAGTATCAGCGATATATGTGGACTCTCAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCTAAGTATCTGATCAGGACTAGTTTTTTGTATGGAAATTATGATGGGCTGAATAAGGTACCAAAGTTTGACGTTCATATCGGGGCTAATCGGTGGGGTACAGTGAACATAAACAATGGATCAAGTGAGCAGGGCAATGAGATCATACATGTGCCTTCAATGGATTATGTACAGATTTGTCTGGTTGACAAAGGCCATGGAACACCATTTATAACAGCCATAGAATTGAGAACTTTGACAGATGATATTTATGTGACTGAATCTGGATCATTGGAAACTTACATCCGGTGGGATATGGGTTCAAACATCGGCTACAGGTACAAGGATGATGTTTATGATCGCTACTGGAGATATGGCAACATCAATAATTGGACACAATTAAGTGTTTCGATTTCTTCTGCTGATGCTTTAGAGCAGAACGTATACCAACCGCCAGCAATTGTGATGAGCACTGCAGTTACACCATCAAATGTTAGTGCTCCATTGGTAATAAACTGGATGCCAGATGATCCAACTGATAAATTCTATGTTTACATGTACTTCATGGAGATTCAAGTGTTAACCACCAATCAGACAAGAGAATTCAACATCGTGGAAAATGGTATACAGAGGTATTCGAAGTTTTCACCCAAGAATCTAGTTGCCACCACTTTATATAGCTCGTCAGCCTCCAGTGGGTCAGAAATTATATATTCTCTTCAAAAGACCAAAAACTCAACCCTGCCTCCCATCATCAATGCCCTTGAAATTTACAAAGCAATCGATTTCCCGCAATCAGAAACATTCAAAGGAGATGATGATGCCATTACAGCCATCAAATCAATTTATGGGGTCACAAGAGATTGGCAAGGTGATCCATGTGCCCCTGTAGATTACTTGTGGGATGGTTTGAATTGTAGTTATAACAAAAAAGAGTCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGGTTGTCAGGAAAGATAGACCCTTCAATTTCAAACCTCAGCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAGCGGTGAAATTCCTGAGTTTCTGTCTCAATTTCAACACTTAAAGATATTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCCTCGGCACTTGTTGAAAAATCCAAGGAAGGTTCTCTGTCACTAAGTGTGGACCAAAATCCAAATCTCTGTGAATCTGGTCAATGCAACGTGCAGGATGAGGAGAAGGAAAAGGAAAAGAAAGAGAAAAACAACATTGTTGCACCCATAGTAGCAACAGTTAGTGGGGTTGTGATCCTTCTCATTGTCGTGGTAGCTGTAGTATGGATGCTTAAAAGGAGAAAATTGAAAGCTTTGATAGTAGAAAAGGATCAAAGTCAGATCTCACCACAATACACAGAACAAGATGATCTAGTGCTACCATTGAGAAAACAAATTTATTCCTACTCCGATGTCCTTAAAATCACCAACAATTTCAATACAACTCTGGGTAAAGGAGGATTTGGAACTGTTTATCTGGGCCATATCGATGACACTCCAGTTGCAGTGAAAATGCTTTCCTCATCGTCTGTCCAGGGTTTTCAACAATTTCAGGCAGAGGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTAACCTCCCTTGTTGGTTATTGTAATGAAGAAACCAAGAAGGGTCTCATATATGAGTACATGGCTAATGGAGACTTACAAGAACATCTCTCTGGTAAACACAGCAAAACAAAATTCTTCACCTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCCTTAGGTTTGGAATATCTGCAAAATGGTTGCAAGCCACCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGAATGAACAATTCCAAGCAAAGTTAGCTGATTTTGGTCTATCCAAAATTATCCCAACTGAAGGTGGAACTCACGTGTCAACTGTTGTTGCCGGTACTCCTGGTTATCTGGACCCTGAGTACTTCATAACAAACAGATTGACAGAAAAGAGTGATGTTTTCAGTTTTGGTGTTGTTCTTTTGGAGATAATCACAAATCAACCAGTGATAATGAGAGGTGAAGAAAGTATTCACATAAGTGACTGGGTTAAATCCTTGGTTTTGAAAGGGGATATCAAAGCCATTGTTGACTCAAGGCTAGAAGGAGATTATGATACCAGTTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCATGTGTGTCTCCAAATATGAACAGAAGGCCAATCACAAGCGTGATAGTGATTGAACTGAAGGAGTCTTTATCAATGGAAGTAGCTCGAACAAAACACAGAGGTAACCCTTTAACACATTCAGGGGTCTCCATGAATCTGAATACCGAGTTTATTCCTCATGCCAGATAA	2679	0.3931	MGMLRCFLVGFVGGLVLAALIQAQDQSGFISIDCGATADVSFTESKTGINYTSDANLINTGVSMSIESDLKKKYQRYMWTLRSFPEGKRNCYKINITRGSKYLIRTSFLYGNYDGLNKVPKFDVHIGANRWGTVNINNGSSEQGNEIIHVPSMDYVQICLVDKGHGTPFITAIELRTLTDDIYVTESGSLETYIRWDMGSNIGYRYKDDVYDRYWRYGNINNWTQLSVSISSADALEQNVYQPPAIVMSTAVTPSNVSAPLVINWMPDDPTDKFYVYMYFMEIQVLTTNQTREFNIVENGIQRYSKFSPKNLVATTLYSSSASSGSEIIYSLQKTKNSTLPPIINALEIYKAIDFPQSETFKGDDDAITAIKSIYGVTRDWQGDPCAPVDYLWDGLNCSYNKKESPRITTLNLSSSGLSGKIDPSISNLSMLEKLDLSNNSLSGEIPEFLSQFQHLKILNLEKNNLSGLIPSALVEKSKEGSLSLSVDQNPNLCESGQCNVQDEEKEKEKKEKNNIVAPIVATVSGVVILLIVVVAVVWMLKRRKLKALIVEKDQSQISPQYTEQDDLVLPLRKQIYSYSDVLKITNNFNTTLGKGGFGTVYLGHIDDTPVAVKMLSSSSVQGFQQFQAEVKLLMRVHHKNLTSLVGYCNEETKKGLIYEYMANGDLQEHLSGKHSKTKFFTWEERLRIAVDAALGLEYLQNGCKPPIIHRDIKSTNILLNEQFQAKLADFGLSKIIPTEGGTHVSTVVAGTPGYLDPEYFITNRLTEKSDVFSFGVVLLEIITNQPVIMRGEESIHISDWVKSLVLKGDIKAIVDSRLEGDYDTSSVWKAVEIATACVSPNMNRRPITSVIVIELKESLSMEVARTKHRGNPLTHSGVSMNLNTEFIPHAR*	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g02461	892	ProSitePatterns	Protein kinases ATP-binding region signature.	593	614	IPR017441	GO:0005524
	Phac5g02461	892	Gene3D	Phosphorylase Kinase; domain 1	574	661	-	-
	Phac5g02461	892	SUPERFAMILY	Protein kinase-like (PK-like)	567	850	IPR011009	-
	Phac5g02461	892	Gene3D	Transferase(Phosphotransferase) domain 1	662	874	-	-
	Phac5g02461	892	SMART	serkin_6	587	830	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02461	892	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	662	869	-	-
	Phac5g02461	892	SUPERFAMILY	L domain-like	378	474	-	-
	Phac5g02461	892	PANTHER	OS07G0107800 PROTEIN-RELATED	30	860	-	-
	Phac5g02461	892	ProSiteProfiles	Protein kinase domain profile.	587	860	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02461	892	Gene3D	Ribonuclease Inhibitor	367	490	IPR032675	-
	Phac5g02461	892	Pfam	Malectin-like domain	32	351	IPR024788	-
	Phac5g02461	892	Pfam	Leucine Rich Repeat	432	451	IPR001611	GO:0005515
	Phac5g02461	892	Pfam	Leucine Rich Repeat	455	474	IPR001611	GO:0005515
	Phac5g02461	892	FunFam	Leucine-rich repeat receptor-like protein kinase	560	661	-	-
	Phac5g02461	892	Pfam	Protein tyrosine and serine/threonine kinase	589	798	IPR001245	GO:0004672\|GO:0006468
	Phac5g02461	892	Coils	Coil	494	514	-	-
	Phac5g02461	892	CDD	STKc_IRAK	593	858	-	-
	Phac5g02461	892	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	708	720	IPR008271	GO:0004672\|GO:0006468
	Phac5g02461	892	FunFam	Leucine-rich repeat receptor-like kinase	366	496	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g02461	Phac-Chr5	42692326	42696959	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g02461	1	892	Receptor kinase-like Gene Family	AT1G51800	48.732	0.0	872

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Phac5g02461		Malectin_like	2.6e-112	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g02461	-		-	gmx:106794186	1318.91