Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02460 ATGAAAGGATACTTTCTACTTCTGATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCATGGCCGGAGTCAATCAGGATTCATCAGTATTGACTGTGGACTTGTGGATGAACCAAGCTATACAGATGAAACTAGTGCCATCTACTACTCTTCGGATGTCAACTTCACAGACAGTGGTGTAAGCCACAGCATATCACCTAAATATAAGGCTTCCCTTGAAAGGCAGTTCTGGAATGTTAGAAGCTTCCCAGTTGGAACCAGGCACTGCTATACCCTTGTTTCTCAAGGAAGTGGCAAGAAGTATTTAGTGAGGGCAAGGTTTGCATATGGAAGTTACGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATCTTGGAGAAAAATGGTGGGGATCAGTGGTGTTTGAGGATGCAGCCAGTGTAGTCACCAAAGAAATCATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTATTCAACACTGGCAAGGGTACACCTTTTATTTCAGTTTTGGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAGTCAACTATGTGGAGCTCTTGGCACGGTTTGATGTAGGCTTAAAGGATGGTGAAGTAGTGAGATTTCCAGATGATGTCTATGATAGAATATGGACACCTTACAACTCAAATGACTGGAAACAGATTGATACCCTCCTTACCATAGACCAAGGTGCTACTTCATATAACTTTTTACCATTGCCACCCTCCAATGTCATGGGAACAGCAGCAATTCCAGCAAATGTCAAGGACAATATAGAGTTCCACTTCCTTCCCGAGTATAATTCTTCCACACTTTATTTGTACATGTTTTTTGCTGAAATCCAGAAGCTTCAGGCAAACCAAACGAGAGAGTTCAACATTTTTGTAAATGGGGACATTTTAAATAATTATCCAATCAATCCTTTATACCTGCAGAGTGTGTATCACATAGCTCTAACTGAAAAACCGTTGGACATTTGGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATACCACAAGAAACCTCTCACAATCTGCAACATATCAAACAGATGTTGATGGTATAATAAATGTCAAGTCAATGTATGGAATCAAGAGAAACTGGCAAGGAGATCCTTGTATACCAGTAGCTTACTTGTGGGACGGTCTTAACTGCAGCTATGAATCTGGTTCAGCAAGAATTATATACTTGAACTTATCTTCCAGTGGTTTAACTGGTAATATAGCCCCTGGAATATCCAATCTGCAGTACTTGGAATATTTGGATTTGTCAAACAACAATTTGACCGGGGCCGTGCCTGAATTCCTACTTCAACTAAGCTTCTTAAGAGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACAATTCCAACGCAACTCATGGTACTTTCCCAGAACGGTTTACTTGAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCCCGGGTTCATGCAACAATAAAAATGGGAACAGAGTTGTAGTTTCACTGGTGGTATCGCTCGGTGGAGCTTTCGTGATACTAGTAATAACACTGATTTCTTTCTACATACACAAAAGGAGACAACCAGTTTCAGCTAGCAAACGGATTGGCTATTCCAGAATAAAGGAGGAACTAGAGACAAATAAACAAGAATTCACCTATGCTGAAGTCCTGAGCATGACCAAAAATTTTGAAAGAGTTGTAGGAAAAGGAGGATTTGCTACAGTCTACCATGGCTGCATAGATGGTACTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCCCAAGGGTATCTGCAATTTAAGGCAGAGGCCAAATTTGTTGCTGTAGTTCATCATAAATTTTTAACTTCTCTAATAGGATATTGTGATGATGGCGAGAATATGGCTCTAATCTATGAGTATATGGCTAATGGAGACTTGGCAAAACATTTATCAGGTATTGTTTAA 1971 0.3968 MKGYFLLLIFQLSLILPIIVHGRSQSGFISIDCGLVDEPSYTDETSAIYYSSDVNFTDSGVSHSISPKYKASLERQFWNVRSFPVGTRHCYTLVSQGSGKKYLVRARFAYGSYDGKDSLPEFDIYLGEKWWGSVVFEDAASVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNYVELLARFDVGLKDGEVVRFPDDVYDRIWTPYNSNDWKQIDTLLTIDQGATSYNFLPLPPSNVMGTAAIPANVKDNIEFHFLPEYNSSTLYLYMFFAEIQKLQANQTREFNIFVNGDILNNYPINPLYLQSVYHIALTEKPLDIWINKTSRSTLPPLLNAIEIYTTRNLSQSATYQTDVDGIINVKSMYGIKRNWQGDPCIPVAYLWDGLNCSYESGSARIIYLNLSSSGLTGNIAPGISNLQYLEYLDLSNNNLTGAVPEFLLQLSFLRVLNLEGNQLSGTIPTQLMVLSQNGLLESNFGGNPNLCSPGSCNNKNGNRVVVSLVVSLGGAFVILVITLISFYIHKRRQPVSASKRIGYSRIKEELETNKQEFTYAEVLSMTKNFERVVGKGGFATVYHGCIDGTEVAVKMLSPSAQGYLQFKAEAKFVAVVHHKFLTSLIGYCDDGENMALIYEYMANGDLAKHLSGIV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02460 656 PRINTS Leucine-rich repeat signature 452 465 - -
Phac5g02460 656 PRINTS Leucine-rich repeat signature 431 444 - -
Phac5g02460 656 Pfam Malectin-like domain 31 351 IPR024788 -
Phac5g02460 656 PANTHER OS07G0107800 PROTEIN-RELATED 29 650 - -
Phac5g02460 656 Pfam Leucine rich repeat 410 465 IPR001611 GO:0005515
Phac5g02460 656 SUPERFAMILY L domain-like 390 492 - -
Phac5g02460 656 ProSiteProfiles Protein kinase domain profile. 569 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02460 656 FunFam Leucine-rich repeat receptor-like kinase 363 495 - -
Phac5g02460 656 Gene3D Phosphorylase Kinase; domain 1 551 642 - -
Phac5g02460 656 Pfam Protein tyrosine and serine/threonine kinase 571 652 IPR001245 GO:0004672|GO:0006468
Phac5g02460 656 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Phac5g02460 656 Gene3D Ribonuclease Inhibitor 369 486 IPR032675 -
Phac5g02460 656 SUPERFAMILY Protein kinase-like (PK-like) 553 653 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02460 Phac-Chr5 42687363 42691285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02460 4 654 Receptor kinase-like Gene Family AT2G19210 45.195 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac5g02460 Malectin_like 3.1e-96 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02460 - - gmx:100778537 1083.55