LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g02458	ATGAAAGGATACTTTCTACTTCTGATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCATGGCCGGAGTCAATCAGGATTCATCAGTATTGACTGTGGACTTGTGGATGAACCAAGCTATACAGATGAAACTAGTGCCATCTACTACTCTTCGGATGTCAACTTCACAGACAGTGGTGTAAGCCACAGCATATCACCTAAATATAAGGCTTCCCTTGAAAGGCAGTTCTGGAATGTTAGAAGCTTCCCAGTTGGAACCAGGCACTGCTATACCCTTGTTTCTCAAGGAAGTGGCAAGAAGTATTTAGTGAGGGCAAGGTTTGCATATGGAAGTTACGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATCTTGGAGAAAAATGGTGGGGATCAGTGGTGTTTGAGGATGCAGCCAGTGTAGTCACCAAAGAAATCATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTATTCAACACTGGCAAGGGTACACCTTTTATTTCAGTTTTGGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAGTCAACTATGTGGAGCTCTTGGCACGGTTTGATGTAGGCTTAAAGGATGGTGAAGTAGTGAGATTTCCAGATGATGTCTATGATAGAATATGGACACCTTACAACTCAAATGACTGGAAACAGATTGATACCCTCCTTACCATAGACCAAGGTGCTACTTCATATAACTTTTTACCATTGCCACCCTCCAATGTCATGGGAACAGCAGCAATTCCAGCAAATGTCAAGGACAATATAGAGTTCCACTTCCTTCCCGAGTATAATTCTTCCACACTTTATTTGTACATGTTTTTTGCTGAAATCCAGAAGCTTCAGGCAAACCAAACGAGAGAGTTCAACATTTTTGTAAATGGGGACATTTTAAATAATTATCCAATCAATCCTTTATACCTGCAGAGTGTGTATCACATAGCTCTAACTGAAAAACCGTTGGACATTTGGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATACCACAAGAAACCTCTCACAATCTGCAACATATCAAACAGATGTTGATGGTATAATAAATGTCAAGTCAATGTATGGAATCAAGAGAAACTGGCAAGGAGATCCTTGTATACCAGTAGCTTACTTGTGGGACGGTCTTAACTGCAGCTATGAATCTGGTTCAGCAAGAATTATATACTTGAACTTATCTTCCAGTGGTTTAACTGGTAATATAGCCCCTGGAATATCCAATCTGCAGTACTTGGAATATTTGGATTTGTCAAACAACAATTTGACCGGGGCCGTGCCTGAATTCCTACTTCAACTAAGCTTCTTAAGAGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACAATTCCAACGCAACTCATGGTACTTTCCCAGAACGGTTTACTTGAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCCCGGGTTCATGCAACAATAAAAATGGGAACAGAGTTGTAGTTTCACTGGTGGTATCGCTCGGTGGAGCTTTCGTGATACTAGTAATAACACTGATTTCTTTCTACATACACAAAAGGAGACAACCAGTTTCAGCTAGCAAACGGATTGGCTATTCCAGAATAAAGGAGGAACTAGAGACAAATAAACAAGAATTCACCTATGCTGAAGTCCTGAGCATGACCAAAAATTTTGAAAGAGTTGTAGGAAAAGGAGGATTTGCTACAGTCTACCATGGCTGCATAGATGGTACTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCCCAAGGGTATCTGCAATTTAAGGCAGAGGCCAAATTTGTTGCTGTAGTTCATCATAAATTTTTAACTTCTCTAATAGGATATTGTGATGATGGCGAGAATATGGCTCTAATCTATGAGTATATGGCTAATGGAGACTTGGCAAAACATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGACTTCAAATTGCAGTGGATGCTGCTGAAGGATTGGAGTATTTGCATCATGGCTGCAATGTACCAATTGTTCACAGAGATGTTAAGTCTAAGAACATCTTGGTGAATGAAAAATTGCGGGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTATCCTGATGAAAGTGACACCCATATGACCACAGTGGTAGCTGGCACCCTGGGATATCTTGATCCAGAGTACAATAGATCACACAGGTTGAATGGAAAAAGTGATGTTTTCAGTTTTGGAGTAGTTCTGCTTGAGATAATTACAGGTCAACCTGCTATAACCAGATCTGAAGACAAAACTCACATAGTTCAATGGGTTCATTCTGTGCTACTTGAAAGGGAGATCAATGATATTGTAGATTCAAGATTGCAGGGAGAATTTGACATTGATTCTGTAAAGAAGGTCTTAGACACTGCAATGGCTTGTGTAGCAGCCACTTCAATTCATAGGCCAACCATGAATGATGTAGTGAATGAACTGAAACAATGTTTGTCAAACAAGATGACTCCTCCCTTTGACTCTGATGATCTTGAGAGTTCATCCAACAGCTCAATCACTGTCTCCTTTGATGGAATTAGTGGAGAGAGCTCTCTAGAGAGATAG	2628	0.3988	MKGYFLLLIFQLSLILPIIVHGRSQSGFISIDCGLVDEPSYTDETSAIYYSSDVNFTDSGVSHSISPKYKASLERQFWNVRSFPVGTRHCYTLVSQGSGKKYLVRARFAYGSYDGKDSLPEFDIYLGEKWWGSVVFEDAASVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNYVELLARFDVGLKDGEVVRFPDDVYDRIWTPYNSNDWKQIDTLLTIDQGATSYNFLPLPPSNVMGTAAIPANVKDNIEFHFLPEYNSSTLYLYMFFAEIQKLQANQTREFNIFVNGDILNNYPINPLYLQSVYHIALTEKPLDIWINKTSRSTLPPLLNAIEIYTTRNLSQSATYQTDVDGIINVKSMYGIKRNWQGDPCIPVAYLWDGLNCSYESGSARIIYLNLSSSGLTGNIAPGISNLQYLEYLDLSNNNLTGAVPEFLLQLSFLRVLNLEGNQLSGTIPTQLMVLSQNGLLESNFGGNPNLCSPGSCNNKNGNRVVVSLVVSLGGAFVILVITLISFYIHKRRQPVSASKRIGYSRIKEELETNKQEFTYAEVLSMTKNFERVVGKGGFATVYHGCIDGTEVAVKMLSPSAQGYLQFKAEAKFVAVVHHKFLTSLIGYCDDGENMALIYEYMANGDLAKHLSGKSKNILSWNQRLQIAVDAAEGLEYLHHGCNVPIVHRDVKSKNILVNEKLRGKLADFGLSKIYPDESDTHMTTVVAGTLGYLDPEYNRSHRLNGKSDVFSFGVVLLEIITGQPAITRSEDKTHIVQWVHSVLLEREINDIVDSRLQGEFDIDSVKKVLDTAMACVAATSIHRPTMNDVVNELKQCLSNKMTPPFDSDDLESSSNSSITVSFDGISGESSLER*	876

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g02458	875	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	643	845	-	-
	Phac5g02458	875	SMART	serkin_6	569	839	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02458	875	MobiDBLite	consensus disorder prediction	846	875	-	-
	Phac5g02458	875	Gene3D	Phosphorylase Kinase; domain 1	551	642	-	-
	Phac5g02458	875	FunFam	Leucine-rich repeat receptor-like kinase	363	495	-	-
	Phac5g02458	875	Pfam	Malectin-like domain	31	351	IPR024788	-
	Phac5g02458	875	SUPERFAMILY	Protein kinase-like (PK-like)	553	835	IPR011009	-
	Phac5g02458	875	PRINTS	Leucine-rich repeat signature	452	465	-	-
	Phac5g02458	875	PRINTS	Leucine-rich repeat signature	431	444	-	-
	Phac5g02458	875	Gene3D	Ribonuclease Inhibitor	369	485	IPR032675	-
	Phac5g02458	875	Gene3D	Transferase(Phosphotransferase) domain 1	643	857	-	-
	Phac5g02458	875	Pfam	Protein tyrosine and serine/threonine kinase	571	835	IPR001245	GO:0004672\|GO:0006468
	Phac5g02458	875	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	687	699	IPR008271	GO:0004672\|GO:0006468
	Phac5g02458	875	PANTHER	OS07G0107800 PROTEIN-RELATED	29	840	-	-
	Phac5g02458	875	ProSitePatterns	Protein kinases ATP-binding region signature.	575	596	IPR017441	GO:0005524
	Phac5g02458	875	CDD	STKc_IRAK	575	837	-	-
	Phac5g02458	875	ProSiteProfiles	Protein kinase domain profile.	569	839	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g02458	875	SUPERFAMILY	L domain-like	390	492	-	-
	Phac5g02458	875	Pfam	Leucine rich repeat	410	465	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g02458	Phac-Chr5	42685993	42691285	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g02458	4	840	Receptor kinase-like Gene Family	AT2G19210	46.667	0.0	748

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Phac5g02458		Malectin_like	6e-96	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g02458	-		-	gmx:100778537	1444.1