Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02457 ATGGACGGTCTAAGTTGGGATTCCTCATCACAACTTGTTGGTAACATACCGAGCTTGTGGAGTAGTCATCCCCAAGACCTTGAAGGAGAGTATCATCATTCCTTGCCACACTTTTTTTCAAGTGTTCTCAATCAAACAGGTTATCCATATCCCTGTTCTGAAAAAGAAAGGGAGATGGTTCACCCATCCACTTCTGAGATAATGAGTATTCTGTCACAAAGAACAGCAACCATGCCTGTGAAATCAGGAGCAGCTGGAGCCAGTTGGGGAGAAGCTTTAACATCCCAATCATGTCCCTCCCTTTCTGCCAATATGAACCAAACTAGCAATTATCAAACAGATTTCAACATGACCCACCAGCAAGAACACCTTATCAATGGTATACAAAACGGCAAGGCTACCTGTTCTCTTGAGTCACTTGATTGCTTGCTTTCAGATACTAAGAATGGCAACACAGACACGTCTATCGAAGATGATGGGATTTCCATGATGGTTTTATCTGACTGCACAAACTTATGTAACTTCAATTATGGCAGTGCAGTTTCCTCAGGTGAATCTGAGAGCAATGCTTCCAATGCAAGAAACAGTGACATGCAGTATCCATCAGTGAATGAGCTGGATGAAACAGTGTCTCAAAGCTTCTCTGATCAATATATCAGTCAAGCAAGAGTTATAGACTCTGATCAAGTTATTTGCACAAAAGGGAGCAATTCATGCTTCAGCATTGCTCATAATTCTTTCAGGCTTGTCTCAGAGACTTCACCAAAGTCCAAGAGACCCAGATGGGATAAGCATCCTGGTTCATCAAATATCAACTTCCAGCAGCCAAATTCATCTGTGTCACCTTCCTTTGAAGAACCTGATCCAGAGGCCGTAGCACAAATGAAGGAAATGATATATAGGGCTGCAGCTTTTAGGCCAGTGAACTTGGGATTGGAAGTGGTGGAAAAGCCCAAGAGGAAGAATGTTAGGATATCAACTGATCCACAGACTGTGGCTGCCAGGGAAAGAAGGGAGAGAATAAGTGAGAGGATTAGGGTTTTGCAGAAGATTGTGCCTGGTGGAAGCAAGATGGACACTGCATCAATGCTTGATGAAGCTGCAAACTACCTCAAGTTTCTCAGAGCACAAGTCAAAGCACTAGAAAATATAGGTAACAAGCTTCAGACAATGAATTCTCCTCCTAACATAGCCTTCTCTTTCAACCCTTCTTTTCCCATACAAACACATTTCCCCCTCCAAAACCCTAGTAGCCACACCCACATCCAACATTCCAAGGGTTGGAAATGA 1290 0.4302 MDGLSWDSSSQLVGNIPSLWSSHPQDLEGEYHHSLPHFFSSVLNQTGYPYPCSEKEREMVHPSTSEIMSILSQRTATMPVKSGAAGASWGEALTSQSCPSLSANMNQTSNYQTDFNMTHQQEHLINGIQNGKATCSLESLDCLLSDTKNGNTDTSIEDDGISMMVLSDCTNLCNFNYGSAVSSGESESNASNARNSDMQYPSVNELDETVSQSFSDQYISQARVIDSDQVICTKGSNSCFSIAHNSFRLVSETSPKSKRPRWDKHPGSSNINFQQPNSSVSPSFEEPDPEAVAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARERRERISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRAQVKALENIGNKLQTMNSPPNIAFSFNPSFPIQTHFPLQNPSSHTHIQHSKGWK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02457 429 MobiDBLite consensus disorder prediction 267 284 - -
Phac5g02457 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 374 IPR011598 GO:0046983
Phac5g02457 429 SMART finulus 331 380 IPR011598 GO:0046983
Phac5g02457 429 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 152 425 IPR045843 GO:0003700|GO:0006355
Phac5g02457 429 Pfam Helix-loop-helix DNA-binding domain 335 374 IPR011598 GO:0046983
Phac5g02457 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 330 391 IPR036638 GO:0046983
Phac5g02457 429 Gene3D - 330 394 IPR036638 GO:0046983
Phac5g02457 429 Coils Coil 364 384 - -
Phac5g02457 429 MobiDBLite consensus disorder prediction 251 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02457 Phac-Chr5 42680922 42683049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02457 89 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.218 1.71e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac5g02457 HLH 3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02457 - - gmx:100793830 618.231