Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02440 ATGAGTCGAGAACAGCAGAAGCGAGGAAAGCAAGAAATATGTTCTGATGACGCGGAAAAGGTCATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAAACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTACCTTCACAGAGTTCGGGCAGAAGATTATGGGGTTTTCCAAGATTTGCCGGTGATTGTGCGAGTGGTCATAAGAAATCTTCTTCAGGATCATCAAGTTCAGAACAGAAGTGTGATATCACTGACTCTTGCTCTCAAATGATCCTTCAACTCCATGATGTCTATGATCCTAACAAGATAAATGTGAAGATTAAAATTGTTTCTGGATCACCCTGTGGAGCAGTGGCTGCGGAAGCCAAGAAAGCCCAAGCCAATTGGGTAGTTTTAGACAAACAACTCAAACATGAGGAAAAACAATGTATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCGCAACCTAAGGTACTCCGCTTGAATTTGGTTGGAAAAAAAAAGAAGGATCTTGAAGAATTATGTTCACTACCTTCTGAACAAGATCAGTTGGTTGGAAAACAAACTAAGAACAAGAATGGTTCTTTAAATTCCTTAAAAGGTCCAGTTGTCACTCCATCTAGCAGCCCTGAGCTAGGGACACCGTTCACTGCAACTGAAGCTGGTACTTCATCGGTTTCAAGCTCTGATCAAGGAACTTCGCCATTTTTCATCTCTGAGATAAACAGTGAGTCCAAAAAAGAGGAAACTATCAAAGAAAATCCAGAACTTGATGATTCTATATCAGACACAGACAGTGAAAACTTGTCCACTTCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACTGATTTACTTCTGCATCAACGATCATCTCAACCTAAGGAAGAAAGAACCGAGAGATGTCATAATAGGACTCAACTGTCTACTACTAGAGCTTTGCTAGAAAAGTTCTCGAGACTTGATAGAGAAGCTGAAATTGAAATCTCAACCTATAAGACTGACTTAGATTTCAGTGGGAGTGTACGAGAAGCAATATCATTATCTAGAAATAATCCACCTGGTCCACCTCCCTTGTGTTCAGTCTGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCCCGATGGTTCAGCTATGCTGAATTGGAGCTTGCCACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGACAAGTTGTTGCTGTGAAGCAACATAAATTGGCCAGTTCTCAGGGTGATCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGTTGATTGGTTTCTGTATAGAGGATAAGAGAAGGCTATTGGTTTATGAGTACATATGCAATGGATCATTGGATTCTCATTTATATGGGAGACAACGAAAACCATTAGAATGGTCTGCCCGGCAAAAAGTTGCTGTTGGAGCTGCCCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGTGACACAGGAGTGGAAACTAGAGTAATCGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATTACTGAAAAGGCTGATGTTTATTCATTTGGTGTGGTATTAGTGGAACTTGTTACAGGGCGAAAGGCTGTGGATCTCAATAGGCCAAAGGGACAGCAGTGTCTTACCGAGTGGGCACGACCACTGTTAGAAGAATATGCCATTGACGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCGGAGCATGAGGTCTATTGCATGCTGCATGCTGCCTCATTGTGCATAAGGAAAGATCCTTATTCTAGACCACGCATGTCACAGTGGGCTACATTACATACATTTCCCAAACTAAAACTTGATTTAGGAAGTTATAGGCATATAGTTTATTATTCAACTGTCAATTGGGGACTTTTAGGAATTCCTCGTAAAAGTAAAGCAAAGACAGCGCCATTACAACGGCGGTCCCCTGTTGTAAGAGTCACTGGAAGCTTTCTGTGGGAAGCTGAGTACAAATCTTGGCTATTGGGAAAGCAACAAGTCTGTCTAAGTGGACAGACAACATGTGAAGAGACTACAGTTAAAACAATTCACGACGAAGATTGCTGTCTTGTTATGCTAAGCCTTAAAAGAAACAAACTTGGGCTGTGGCTAAGGCTGGTTGTTTCAACTGGCAACAGAAAATGGCAGAGTGATGGCTGTCATTATATGAGGCATGTGAAACAAGAAAACCCTGTGGTTGCATCTTCTTCCTTCGTGGGGTTAGGGTTTTGGGGTAGCCGAATTTTTCGTGTTCCCGACGATACGAGAAAATGTTGGGATTCTTCTATTGACTCCTCTCGCCAACTCGCGAAATACGAGTCGTTCCATCGTATATGCGCCACACCAAACCACGCTTTGCATGCGTTTGATTTACCATTTGATATGGACGCCGAAGCGGATTCAACTCAAATCCCTAATATAAGACACAAATGCCCGGCATGCTATAAACAATTCAAGAAGAAAGAGCATCTAATTGAGCACATGAAAACCTCAAACCATTCCGTCCATCAGCCTGCATGCGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAGTCTCTGAGGGAACATCTTACTGGTCCTTTGCCAAAAGGAGTTTGTTCAAAGATTTTCTCTCAGCGGGGCTGTCAACTTTGCTTGGTACTATTTGATAGTCCCGGGTCTCTAATTGCTCACAGAGAAACATGTCGCTTATCTGCCCCTACTCGTCTAGGAACACTAGAACTGCCCTGTATAGATTCCCAATTTGACTGTCTAGATTCTTCTGATGAAAACCATGCTGGCTGGGGCCCCGGAGGAGCAGTTGGAATGGACTGTGAAATGGTTGGTGGTGGAAGTGATGGTTCTCTGGAACTTTGTGCAAGAGTATGTTTGGTTGATGAAGATGAGAACTTAATCTTTCATTCATATGTACAACCTCAAATACCTATTACTTGTTTTAGGTTTGATGGGGAGAAGGAAATGAGAAGGAGATATGATATAACTGGATTGACAGAAGAACATCTCAGAAATGCCATGCCCCTTTATAAAGTTCGAGAAAAGGTTTTGCAAATGCTATACAATGGAGAATCCATTGGCAAAGTTAGACTAAATGGTGGAAAGGCCAGGCTTCTTGTGGGGCATGACTTAGCACACGATTTAGATTGCTTGAAAATGAATTATCCTGATCATATGCTGAGAGACACTGCAAAGTACCGTCCTTTGATGAAGACAAACTTGGTCAGCCATTCGCTCAATTATGATATCCAATCCGGCACTCATGATCCGTATGAAGATTGTATTTCTGTCATGAGACTATACAAGAGAATACGAGCTCAAATTCATCCAGAGGAAGGCCATGAAACACCGAGTAACAACAATGTTTGCGTGCCTGATAGCTGGAGATCCAGGCAACTTGACAACCTCACTCCAGATCAGCTCTATGCCATGTCAAAATCGGATTACAAGTGTTGGTGCTTGGATTTGAGGCCTAGATTGGAATCCTGA 3708 0.4296 MSREQQKRGKQEICSDDAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSSSGSSSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGKKKKDLEELCSLPSEQDQLVGKQTKNKNGSLNSLKGPVVTPSSSPELGTPFTATEAGTSSVSSSDQGTSPFFISEINSESKKEETIKENPELDDSISDTDSENLSTSSASLRFQPWITDLLLHQRSSQPKEERTERCHNRTQLSTTRALLEKFSRLDREAEIEISTYKTDLDFSGSVREAISLSRNNPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELIDPRLGSHYSEHEVYCMLHAASLCIRKDPYSRPRMSQWATLHTFPKLKLDLGSYRHIVYYSTVNWGLLGIPRKSKAKTAPLQRRSPVVRVTGSFLWEAEYKSWLLGKQQVCLSGQTTCEETTVKTIHDEDCCLVMLSLKRNKLGLWLRLVVSTGNRKWQSDGCHYMRHVKQENPVVASSSFVGLGFWGSRIFRVPDDTRKCWDSSIDSSRQLAKYESFHRICATPNHALHAFDLPFDMDAEADSTQIPNIRHKCPACYKQFKKKEHLIEHMKTSNHSVHQPACGVCQKHCKSFESLREHLTGPLPKGVCSKIFSQRGCQLCLVLFDSPGSLIAHRETCRLSAPTRLGTLELPCIDSQFDCLDSSDENHAGWGPGGAVGMDCEMVGGGSDGSLELCARVCLVDEDENLIFHSYVQPQIPITCFRFDGEKEMRRRYDITGLTEEHLRNAMPLYKVREKVLQMLYNGESIGKVRLNGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSLNYDIQSGTHDPYEDCISVMRLYKRIRAQIHPEEGHETPSNNNVCVPDSWRSRQLDNLTPDQLYAMSKSDYKCWCLDLRPRLES* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02440 1235 Gene3D - 1007 1189 IPR036397 GO:0003676
Phac5g02440 1235 CDD REX4_like 1009 1175 IPR037431 GO:0006364|GO:0008408
Phac5g02440 1235 MobiDBLite consensus disorder prediction 257 274 - -
Phac5g02440 1235 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 480 679 - -
Phac5g02440 1235 ProSiteProfiles Protein kinase domain profile. 404 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02440 1235 SUPERFAMILY Protein kinase-like (PK-like) 388 676 IPR011009 -
Phac5g02440 1235 CDD STKc_IRAK 410 669 - -
Phac5g02440 1235 Gene3D Phosphorylase Kinase; domain 1 376 479 - -
Phac5g02440 1235 SMART exoiiiendus 1007 1183 IPR013520 -
Phac5g02440 1235 FunFam Dual-specific kinase DSK1-like 12 167 - -
Phac5g02440 1235 ProSiteProfiles Zinc finger C2H2 type domain profile. 884 913 IPR013087 -
Phac5g02440 1235 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 376 479 - -
Phac5g02440 1235 MobiDBLite consensus disorder prediction 200 283 - -
Phac5g02440 1235 PANTHER OS01G0750732 PROTEIN 155 671 - -
Phac5g02440 1235 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Phac5g02440 1235 Gene3D Transferase(Phosphotransferase) domain 1 480 677 - -
Phac5g02440 1235 Pfam Protein kinase domain 408 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02440 1235 Gene3D Classic Zinc Finger 869 934 - -
Phac5g02440 1235 SUPERFAMILY Ribonuclease H-like 1009 1178 IPR012337 -
Phac5g02440 1235 ProSitePatterns Zinc finger C2H2 type domain signature. 886 908 IPR013087 -
Phac5g02440 1235 MobiDBLite consensus disorder prediction 200 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02440 Phac-Chr5 42576077 42587563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02440 870 1228 C2H2 Transcription Factor Family AT3G27970 46.917 1.17e-112 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phac5g02440 Pkinase 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02440 - - gmx:100789216 1237.63