Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02438 ATGGAGGAAATGCCTAAGTTCATCCATGGAACAATTGAAGCTACTATCTTCAGTGCCACACCTTACTCACCTTTGTTTCCCTTCAATTGTGTATATACAAAAGGAAAGCCTGTTCATGTGTCTATCAGGATAGGCAAACAGAAGGTGGCGAAAACGACCCAAGAACGTGAACGTGTGTGGAACCAAACCTTTCAGATTCAGTGTGCTCATTCGGAAGATTCAACTATCACCATTACACTGAAGACATCATGCTTCATTTTGGGGAAATTCCACATGCAGGCCAAGCGGCTGAAGGAAGAGAGTTTGATCAATGGATTATTCCCTCTGCTCATGGAAAATGGAAAACCAAATCCACAACTAAAATTAAGATTTATGTTGTGGTTCAAGCCAGCAGAAATGGAACCAAGTTGGACAAAGATACTACGCAATGGGGAGTTTCAAGGGCTGAGGGATGCTACATTCCCACAAAGGTCCAATTGCCAGGTTAAACTCTATCATGATGCTCACCATTCATCTACCTTCCACCCTCCTTTTGACCTTTGTGGCTCTCCAATAAAGCTGTGGGAAGATGTCTATAAAGCCATTGAAGGTGCAAAATATTTGATTTATATTGCAGGCTGGTCTTTCAATCCCAAGATGGTTCTGGTTAGAGATCCTGAAACAGAAATCCCTCATGCTAGGGAGATAAATCTGGGTGAGTTATTGAAGAAGAAGGCAGAAGAAGGAGTGGCTGTGAGGGTTATGGTTTGGGATGATGAAACATCTTTGCCTTATATTAAGAACAAGGGTGTGATGAACACTCATGATGAGGAAGCTTTTGCATACTTCAAACACACTAAAGTAATATGCAGAAAGTGTCCCAGGTTACACAACAAGTTCCCCACACTCTTTGCTCACCATCAGAAGACCATAACTGTTGACACCAGAACACCCTACTCTGTTCATGCCAGAGAACTTATGAGCTTTTTGGGTGGTTTAGATTTGTGTGGTGGCCGATATGACACAGAAAAACACTCATTGTTTCAGACACTTGCTGAGGAATCCGAATACCATGACTTCTACCAGACAAACATTGCACAAGCTAGCCTCAAGAAAGGAGGACCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTCATTGGTGAGGCTGCTTGGGATGTTTTGACCAATTTTGAACAAAGATGGACAAAGCAGTGTGATCCTTCTCTTCTAGTTCCTGCCAACACTTTAGAAAATCTCATTCCCACATACTCAGGCACTCCAGTAGGAAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTATCTGCTAGCCAGTTGTTTAGAAGGCTAACTGTGGAGAGAAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCGTGCCGATAGGTTTGTATACATTGAAAACCAATATTTTATTGGAGGGTGTCATTTGTGGCAAGAAGATAGGCACAGTGGATGCAGCAATCTGATTCCAATTGAGATTGCACTCAAGGTGGTTAGTAAGATCAAAGCAAGACAGAGGTTTGCAGTGTACATAGTCATACCAATGTGGCCAGAAGGAGTTCCTGAAAGTGAACCAGTCCAAGATATACTTCACTGGACCAGACAAACAATGACAATGATGTATCGGTTCATTGGAGAAGCAATAATAGAAAGTGGGGAGCCAGGGCATCCAAGAGATTACTTGAATTTCTTCTGCCTTGCTAATAGGGAAAAGAAGGAACAAGAGGAGTTTCTTCCACCACTTTCTCCCCATCCTGCAACACAATACTGGAATGCACAAAAGAATAGAAGGTTCCCTATTTATGTTCACTCAAAGATGATGATAGTGGACGACATATACATACTAATAGGATCAGCCAATGTGAACCAAAGATCCATGGATGGACAAAGGGACACTGAGATTGCCATAGGGGCTTACCAGTTTGAAGATGGAGTTGATCACCACATAAACCATGGTGATATTCATGCATACAGAATGTCACTGTGGTATGAGCACACAGGAACTGCTGAGGAATTGTTCTTAGAGCCAGAAAGTTTCGCATGTGTGCAGAGAATGAGGTCGATAGCAGATCATATGTGGGAAATGTACAGCAGTGAAGAAATTGTGGACATGGAAGGTGTGCACCTTGTAAGATACCCTGTGAAAATAACTCTAAAAGGGTATGTGGAGGACCTAGATGACGGTGGGGATCTTTTTCCTGATACAAAATCTCCTGTGAGGGGGAAGAGATCAAAATTGTTAACCCCTGTCTTTACCACTTAA 2274 0.4244 MEEMPKFIHGTIEATIFSATPYSPLFPFNCVYTKGKPVHVSIRIGKQKVAKTTQERERVWNQTFQIQCAHSEDSTITITLKTSCFILGKFHMQAKRLKEESLINGLFPLLMENGKPNPQLKLRFMLWFKPAEMEPSWTKILRNGEFQGLRDATFPQRSNCQVKLYHDAHHSSTFHPPFDLCGSPIKLWEDVYKAIEGAKYLIYIAGWSFNPKMVLVRDPETEIPHAREINLGELLKKKAEEGVAVRVMVWDDETSLPYIKNKGVMNTHDEEAFAYFKHTKVICRKCPRLHNKFPTLFAHHQKTITVDTRTPYSVHARELMSFLGGLDLCGGRYDTEKHSLFQTLAEESEYHDFYQTNIAQASLKKGGPREPWHDAHACVIGEAAWDVLTNFEQRWTKQCDPSLLVPANTLENLIPTYSGTPVGRNWKVQVYRSIDHVSASQLFRRLTVERSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQEDRHSGCSNLIPIEIALKVVSKIKARQRFAVYIVIPMWPEGVPESEPVQDILHWTRQTMTMMYRFIGEAIIESGEPGHPRDYLNFFCLANREKKEQEEFLPPLSPHPATQYWNAQKNRRFPIYVHSKMMIVDDIYILIGSANVNQRSMDGQRDTEIAIGAYQFEDGVDHHINHGDIHAYRMSLWYEHTGTAEELFLEPESFACVQRMRSIADHMWEMYSSEEIVDMEGVHLVRYPVKITLKGYVEDLDDGGDLFPDTKSPVRGKRSKLLTPVFTT* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02438 757 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 602 629 IPR001736 GO:0003824
Phac5g02438 757 SMART pld_4 295 332 IPR001736 GO:0003824
Phac5g02438 757 SMART pld_4 602 629 IPR001736 GO:0003824
Phac5g02438 757 Pfam C2 domain 39 109 IPR000008 -
Phac5g02438 757 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 295 332 IPR001736 GO:0003824
Phac5g02438 757 SUPERFAMILY Phospholipase D/nuclease 141 406 - -
Phac5g02438 757 SUPERFAMILY Phospholipase D/nuclease 425 686 - -
Phac5g02438 757 PANTHER PHOSPHOLIPASE D 35 741 IPR015679 -
Phac5g02438 757 Pfam Phospholipase D C terminal 674 746 IPR024632 -
Phac5g02438 757 Gene3D Endonuclease Chain A 420 647 - -
Phac5g02438 757 PIRSF PLD_plant 29 757 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phac5g02438 757 Pfam Phospholipase D Active site motif 604 629 IPR001736 GO:0003824
Phac5g02438 757 Pfam Phospholipase D Active site motif 296 332 IPR001736 GO:0003824
Phac5g02438 757 Gene3D Endonuclease Chain A 182 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02438 Phac-Chr5 42560980 42564082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02438 30 757 Phospholipase D Gene Family (Wang group) AT1G55180 61.269 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02438 K01115 - gmx:100807431 1377.46